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The GATA2 Database is a curated repository of germline GATA2 variants identified in patients through published literature and direct referrals. Our goal is to provide a comprehensive knowledge base for understanding GATA2 variants. The second release (August 2025) focuses on documentation of published variants and associated main phenotypes.
If you are interested in contributing variants, please contact wlodarskilab@stjude.org
GATA2 transcript version is NM_032638.5. Curated by Lili Kotmayer, MD, PhD. Last updated: 07/29/2025.
Patient ID | Germline mutation (cDNA) | Germline GATA2 mutation (Protein) | Type of mutation (based on VEP) | Population frequency (gnomAD v3.1.2 non-cancer) | Proposed pathogenicity | Inheritance | Year of reporting | PMID | Case also reported in (PMID) | Original patient ID | Presenting diagnosis | Sex (M/F) | Age at diagnosis (yrs) | Karyotype | Signs of immune dysregulation | Viral infections | Mycobacterial infections | Lymphedema | Deafness | Pulmonary symptoms | Co-occurring somatic mutations |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P0001 | 3q21.1‐q21.3 deletion | 3q21.1‐q21.3 deletion | transcript_ablation | Novel | PAT | de novo | 2009 | 19449416 | 26710799, 22147895 | Patient 5 (French girl) / 1 (7108) | MDS | F | 11 | monosomy 7 | Y | ||||||
P0002 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2011 | 21670465 | 20040766, 21816832, 24227816, 23502222, 8701948 | 1.II.5R/1.II.5/ Kindred 1.II.5/1.II.5/3A | MonoMac, MDS-RCMD, LGL, CMML | F | 37 | NA | fever, panniculitis, low NK count, monocytopenia, low B cell count, low T lymphocyte count | perineal HPV with condylomata, parvovirus B19, VZV | Y | progressive PAP-like disease, respiratory failure, pulmonary hipertension | ASXL1 | ||
P0003 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2011 | 21670465 | 20040766, 23502222, 24227816, 25359990, 28642594 | 2.II.3/ Kindred 2.II.3 | MonoMac, MDS-RAEB2, AML, LGL | M | 34 | trisomy 8, t(1;7)(q10; p10) | fever, noncaseating epitheloid granulomas, low NK count, low B cell count | verrucae | Y | pulmonary infiltrates, pleural effusions | |||
P0004 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2011 | 21670465 | 20040766, 23502222, 24227816, 25359990, 23502222, 24077845, 21892162, 28642594, 21816832 | 5.II.1/ Kindred 5/9 | MDS-RCMD, LGL, AML | F | 32 | trisomy 8, monodicentric chromosome 6 | fever, panniculitis, low NK count, low B cell count, monocytopenia, sarcoidosis | genital HPV, verruca plana, verruca vulgaris | Y | intersitial infiltrates, PAP | |||
P0005 | c.1-200_871+527del | p.Met1del290 | transcript_ablation | Novel | PAT | familial | 2011 | 21670465 | 20040766, 22147895, 23502222, 24227816, 25359990 | 13.II.1 | MonoMac, MDS | M | 31 | monosomy 7, trisomy 8 | fever, nonnecrotizing granulomas, hypogranulated neutrophils, no monocyte maturation, sarcoidosis | verruca plana, verruca vulgaris, HSV | Y | pulmonary infiltrates, PAP, PAH | |||
P0006 | c.1-200_871+527del | p.Met1del290 | transcript_ablation | Novel | PAT | unknown | 2011 | 21670465 | 20040766, 22147895, 23502222, 24227816, 25359990 | 13.I.2 | DCML, MDS-RCUD, Emberger syndrome | F | 60 | normal | low NK count, low B cell count, monocytopenia | HPV verrucae | Y | bilateral apical scarring, hilar lymph node calcification | |||
P0007 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2011 | 21670465 | 23365458, 24227816, 25359990, 25111582, 24077845, 28642594, 34529785, 34089740 | 17.I.1/ 17/ Patient 4/ Kindred 17/ 5 | MDS-RCMD | M | 28 | trisomy 8 | low B cell count, monocytopenia | anal HPV, genital HPV | Y | PAP | |||
P0008 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2011 | 21670465 | 24227816, 27169477, 23502222, 28642594, 29375553, 34089740 | 19.II.1/ Kindred 19 | MonoMac | M | 20 | NA | fever, low NK count, low B cell count, low T cell count, monocytopenia | chronic EBV | Y | ||||
P0009 | c.951_952ins11 | p.Asn317PhefsX | frameshift_variant | Novel | LPAT | unknown | 2011 | 21670465 | 22 | NA | NA | NA | NA | ||||||||
P0010 | uniallelic expression of GATA2 | uniallelic expression of GATA2 | transcript_ablation | Novel | PAT | unknown | 2011 | 21670465 | 24227816, 23502222 | 23.I.1 / Kindred 23 | MDS-RCMD | M | 21 | NA | low B, NK, T cell count | Y | |||||
P0011 | c.310_311insCC | p.Leu105ProfsX15 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-01 II-1 | Emberger-syndrome | M | NA | NA | low CD4/CD8 ratio, low CD4/CD8 ratio | Y | ||||||
P0012 | c.310_311insCC | p.Leu105ProfsX15 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-01 II-4 | MDS, AML | F | 50 | NA | skin HPV | Y | ||||||
P0013 | c.310_311insCC | p.Leu105ProfsX15 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-01 III-1 | MDS, AML | F | 11 | NA | Y | |||||||
P0014 | c.310_311insCC | p.Leu105ProfsX15 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-01 III-3 | MDS, AML | F | 9 | monosomy 7 | ||||||||
P0015 | c.310_311insCC | p.Leu105ProfsX15 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-01 III-4 | Emberger-syndrome | M | NA | NA | low CD4/CD8 ratio, low CD4/CD8 ratio | Y | ||||||
P0016 | c.230-1_230insC | p.Arg78ProfsX107 | frameshift_variant | Novel | PAT | unknown | 2011 | 21892158 | Emb-02 I-2 | Emberger-syndrome | F | NA | NA | Y | |||||||
P0017 | c.230-1_230insC | p.Arg78ProfsX107 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-02 II-1 | Emberger-syndrome | F | 16 | monosomy 7 | Y | |||||||
P0018 | c.230-1_230insC | p.Arg78ProfsX107 | frameshift_variant | Novel | PAT | familial | 2011 | 21892158 | Emb-02 II-2 | MDS, AML | M | 17 | monosomy 7 | Y | |||||||
P0019 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 12145700, 28642594 | 1/III-2 | MDS, AML | M | 16 | 1q isochromosome | psoriasis, neutrophilic dermatosis | ||||||
P0020 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 12145700, 28642594 | 1/III-4 | MDS, AML | F | 32 | NA | psoriasis, neutrophilic dermatosis | ||||||
P0021 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 1/III-5 | asymptomatic | M | NA | NA | |||||||
P0022 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 1/III-8 | asymptomatic | M | NA | NA | |||||||
P0023 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 1/III-9 | MDS, AML | M | 30 | NA | |||||||
P0024 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 37406166, 28642594 | 1/IV-1 / Family_1541.001 | MDS-RCMD, AML | M | teenager | monosomy 7, trisomy 21 | |||||||
P0025 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 1/IV-2 | MDS, AML | F | 15 | NA | SETBP1 (G870S), RUNX1 (R201*), ASXL1 (G646fs*), CSF3R (Q768*), NF1 (I697fs*), NRAS (G13V) | ||||||
P0026 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 2/II-4 | MDS | M | 45 | monosomy 7, trisomy 8 | |||||||
P0027 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 2/III-4 | MDS | M | 20 | monosomy 7 | |||||||
P0028 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 2/III-5 | asymptomatic | M | NA | NA | |||||||
P0029 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/II-2 | leukemia | F | 59 | NA | |||||||
P0030 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/II-4 | symptomatic | M | NA | NA | |||||||
P0031 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/II-9 | AML-M2 | F | 32 | const. 9p21-22 variation | |||||||
P0032 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/III-1 | MDS, AML-M2 | M | 38 | normal | |||||||
P0033 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/III-4 | MDS, AML | M | 23 | NA | |||||||
P0034 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/III-6 | MDS-RA, AML | M | 35 | NA | |||||||
P0035 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/III-9 | asymptomatic | M | 61 | NA | |||||||
P0036 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/IV-1 | AML-M7 | F | 21 | monosomy 7, trisomy 8, t(1q:7p) | |||||||
P0037 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21892162 | 28642594 | 3/IV-5 | MDS | M | 15 | monosomy 7, const. 9p21-22 variation | |||||||
P0038 | c.1063_1065del | p.Thr355del | inframe_deletion | Novel | LPAT | unknown | 2011 | 21892162 | 4/II-2 | MDS-RCMD | M | 53 | trisomy 8 | ||||||||
P0039 | c.1063_1065del | p.Thr355del | inframe_deletion | Novel | LPAT | familial | 2011 | 21892162 | 4/III-1 | MDS | M | 13 | monosomy 7 | ||||||||
P0040 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2014 | 24345756 | 29295841 | 14.I.1 | DCML | M | 60 | normal | monocytopenia, lymphocytopenia, low APC counts | HPV | Y | ||||
P0041 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2011 | 21242295 | 21765025, 24345756, 28642594 | 2.I.1 / Subject 2 | DCML | NA | 27 | normal | monocytopenia, lymphocytopenia | skin HPV (hands and feet), H1N1 | Y | ||||
P0042 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2011 | 21242295 | 21765025, 24345756, 29295841, 28642594 | 3.III.1 | DCML | F | 21 | normal | monocytopenia; low IgM count, low APC count | perineal HPV | PAP, respiratory failure | ||||
P0043 | c.1018-1G>T | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2011 | 21242295 | 21765025, 24345756 | 4.I.1 | DCML, MDS | NA | 23 | normal | erythema nodosum | skin HPV (hands) | Y | ||||
P0044 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22147895 | 28642594 | FHCRC-97 / Patient 1 | MDS, DCML, aplastic anemia | F | 10 | del(5q) | recurrent fever | parainfluenza | biCEBPA | ||||
P0045 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22147895 | 28642594 | FHCRC-84 / Patient 2 | MDS | F | 14 | monosomy 7 | |||||||
P0046 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2012 | 22147895 | 28642594 | FHCRC-95 / Patient 3 | MDS, DCML | F | 44 | trisomy 8 | |||||||
P0047 | 3q21.3-q22.3 deletion | 3q21.3-q22.3 deletion | transcript_ablation | Novel | PAT | de novo | 2012 | 22147895 | GC54819 | MDS, DCML | M | NA | NA | ||||||||
P0048 | 3q13.33-q21.3 deletion | 3q13.33-q21.3 deletion | transcript_ablation | Novel | PAT | de novo | 2012 | 22147895 | GC42542 | MDS, AML, DCML | M | 16 | trisomy 21 | Y | |||||||
P0049 | c.310_311insCC | p.Leu105ProfsX15 | frameshift_variant | Novel | PAT | unknown | 2012 | 22533337 | 2 | MDS, AML, Emberger-syndrome | F | 12 | monosomy 7 | Y | |||||||
P0050 | c.121C>G | p.Pro41Ala | missense_variant | 0.0005068 | VUS | familial | 2012 | 22533337 | Family 12 Proband | MDS-RAEB | F | 48 | NA | ||||||||
P0051 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2012 | 22533337 | 32098966, 28642594, | Family 23-23 | AML | M | 14 | NA | |||||||
P0052 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22533337 | 32098966, 28642594, | Family 26-Proband | MDS-RAEB | F | 26 | hyperdiploidy | |||||||
P0053 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2012 | 22533337 | 28642594 | Family 23-brother of 23 | MDS | M | 16 | NA | |||||||
P0054 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22533337 | 28642594 | Family 26-sister | MDS | F | 28 | normal | |||||||
P0055 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22271902 | 28642594 | III-5 | asymptomatic | M | 52 | NA | |||||||
P0056 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22271902 | 28642594 | III-1 | asymptomatic | M | 60 | NA | |||||||
P0057 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22271902 | 28642594 | III-7 | asymptomatic | M | 51 | NA | |||||||
P0058 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22271902 | 32098966, 28642594 | IV-1 | MDS-RAEB1 | M | 18 | monosomy 7 | monocytopenia | plantar HPV | ASXL1 | ||||
P0059 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22271902 | 32098966, 28642594 | IV-6 | MDS-RAEB2 | M | 23 | monosomy 7, isochromosome 17 | ASXL1 | ||||||
P0060 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2012 | 22271902 | 32098966, 28642594 | IV-10 | symptomatic | F | 31 | normal | monocytopenia, low NK cells | ||||||
P0061 | c.871+2_3insT | p.? | splice_donor_variant | Novel | LPAT | unknown | 2017 | 26395816 | 39497062 | African American woman | HLH, blastomycosis | F | 18 | NA | fever, HLH, low B, NK cells counts, monocytopenia, neutropenia | disseminated HSV1 | Y | ||||
P0062 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2013 | 23728141 | 24227816, 27169477, 25359990, 24077845, 29375553, 34089740, 34529785 | 42.I.1 / Filipino man / 43/ 19 | MonoMac, MDS-RCMD | M | 18 | normal | intermittent fever, nonnecrotizing granulomas (lung), low NK count, monocytopenia, lymphocytopenia, erythema nodosum | plantar HPV, palmar HPV, EBV | Y | KDM2A | |||
P0063 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2013 | 23502222 | 25.I.1 | MonoMac, MDS | NA | 13 | NA | low NK count, low B cell count, low T cell count, monocytopenia | HPV | Y | |||||
P0064 | c.769_778dup | p.Tyr260fsX25 | frameshift_variant | Novel | PAT | unknown | 2013 | 23502222 | 24227816, 25359990, 24077845, 21670465, 21892162, 8701948, 21816832, 36357187 | 15/ Kindred 20/Patient 6/ 20.I.3/20.I.1 | MonoMac, MDS | M | 13 | monosomy 7 | low NK count, low B cell count, low T cell count, monocytopenia | HPV, mulloscum contagiosum | Y | Y | |||
P0065 | c.941_951dup | p.Ala318ThrfsX12 | frameshift_variant | Novel | LPAT | unknown | 2013 | 23502222 | 24227816, 25359990, 24077845, 21670465, 36357187 | 22.I.1/39/ Kindred 22 / Patient 3 | MonoMac, MDS-RCMD | F | 25 | monosomy 6 | low NK count, low B cell count, low T cell count, monocytopenia, lupus anticoagulant positivity | HPV | Y | Y | PAP | ||
P0066 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2013 | 23502222 | 30.II.1 | MonoMac | NA | 21 | NA | low NK count, low B cell count, monocytopenia | HSV | Y | |||||
P0067 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2013 | 23502222 | 24227816, 20040766, 37406166 | 4.II.5R/ 4.II.5 / Family_4_3 | MDS, AML | F | 19 | monosomy 7 | low NK count, low B cell count | HPV | IRF4 | ||||
P0068 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2013 | 23502222 | 24227816, 37406166, 34529785 | 4.III.2R/ 4.III.2 / Family_4_4/ 91 | asymptomatic | F | 23 | NA | low NK count | ||||||
P0069 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2013 | 23502222 | 37406166 | 4.III.3 / Family_4_5 | asymptomatic | NA | 21 | NA | low NK count | ||||||
P0070 | c.1017+512del | p.= | regulatory_region_variant | Novel | VUS | unknown | 2013 | 23502222 | 24227816, 20040766, 23365458, 22996659, 24077845, 34529785 | 6.I.1R/ 6.I.1/ Patient 5/ 25/ 102 | symptomatic | M | 13 | NA | B, NK cell low, monocytopenia | Y | |||||
P0071 | c.1017+512del | p.= | regulatory_region_variant | Novel | VUS | familial | 2013 | 23502222 | 6.III.2 | asymptomatic | NA | 1.5 | NA | ||||||||
P0072 | c.1-276T>G | p.= | regulatory_region_variant | Novel | VUS | unknown | 2013 | 23502222 | 33.II.1 | symptomatic | NA | 50 | NA | ||||||||
P0073 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2013 | 23223431 | 29724903, 22533337, 36727400, 28642594 | P46 (mother)/ Family 23 Mother/ P1.II-4 (#6227)/ 66 | AML-M2 | F | 35 | normal | monocytopenia, neutropenia | CMV | ASXL1, SETBP1, U2AF1 | ||||
P0074 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2013 | 23223431 | 26710799, 29724903, 22533337, 36727400, 28642594 | P46*/Family 23 Brother/ P1.III-2/ 64 / P1.III-2/ 6 (6165) | immunodeficiency, MDS-RCMD | M | 16 | trisomy 8 | low NK count, low B cell count, monocytopenia | chronic EBV replication | pulmonary distress syndrome, bronchiectasis | ||||
P0075 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2013 | 23223431 | 29724903, 22533337, 36727400, 28642594 | P46 (brother)/ Family 23 Brother/ P1.III-3 / 63 (6225) | immunodeficiency, AML-M2 | M | 12 | trisomy 11, monosomy 7, si,del(7)(q32), si,del(7)(7p?ter-7q11::7q22q31) | monocytopenia, neutropenia | WT1 | |||||
P0076 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2013 | 23223431 | 29724903, 36727400, 28642594 | P46 (brother) / 65 | MDS | M | 6 | monosomy 7 | recurrent fever, neutropenia | chronic weak EBV replication | ASXL1 | ||||
P0077 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | familial | 2013 | 23223431 | 29724903, 36727400 | P36* / 34 | AML-M5 | F | 13 | monosomy 7, trisomy 15, trisomy 20, t(11;19) | low NK count, lymhpocytopenia, monocytopenia | H1N1 pneumonia, labial HSV | |||||
P0078 | c.1162A>G | p.Met388Val | missense_variant | Novel | LPAT | unknown | 2013 | 23223431 | 29724903 | P43 (mother) | WHIM-like syndrome, MDS | F | 30 | trisomy 8 | low NK count, low B cell count, monocytopenia, WHIM syndrome | skin HPV, genital HPV, HSV | |||||
P0079 | c.1162A>G | p.Met388Val | missense_variant | Novel | LPAT | familial | 2013 | 23223431 | 29724903 | P43* | MDS | M | 12 | trisomy 8, monosomy 7q | monocytopenia | ||||||
P0080 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903, 36727400 | P15* / 37 | AML-M2 | M | 8 | trisomy 1, der(1;7)(q10;p10),9qh+c[5], trisomy 1q, monosomy 7q | low NK count, low B cell count, monocytopenia | cutaneous HPV | |||||
P0081 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903 | P15 (brother) | MDS | M | 19 | trisomy 1,der(1;7)(q10;p10), monosomy 21 | low NK count, low B cell count, monocytopenia, dendritic cell deficiency | HPV | |||||
P0082 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903 | P15 (brother) | symptomatic | M | 14 | normal | low B cell count | ||||||
P0083 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903 | P15 (father) | asymptomatic | M | 56 | NA | low B cell count | ||||||
P0084 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903 | P15 (paternal uncle) | symptomatic | M | 31 | NA | monocytopenia | cutaneous and genital HPV | |||||
P0085 | c.1025_1026insGCCG | p.Ala342GlyfsX41 | frameshift_variant | Novel | LPAT | unknown | 2013 | 23365458 | 2543925 | Patient 1 | NK-cell deficiency, aplastic anemia | F | NA | NA | no NK cells | VZV,CMV,HSV | interstitial lung disease | ||||
P0086 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2013 | 23365458 | 20040766, 23502222, 24227816, 21892162, 24077845, 37406166 | 4.II.1/Patient 3/ 5 /Family_4_2 | NK-cell deficiency, MDS-RCMD, LGL | F | 38 | normal | fever, common variable immunodeficiency, low NK count, low B cell count, monocytopenia, discoid lupus, erythema nodosum | HPV, CMV | Y | PAP, dyspnea | ASXL1, U2AF1 | ||
P0087 | c.417dup | p.Val140CysfsX44 | frameshift_variant | Novel | PAT | de novo | 2013 | 23365458 | 24227816, 25359990, 24077845, 30578959, 34529785 | 38.I.1/ 33/ Patient 8/ Patient 13/ 15 | NK-cell deficiency, MDS-RCUD | F | 7 | normal | low NK count, low B cell count, monocytopenia | HPV | ASXL1, ASXL1, JAK2 | ||||
P0088 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | familial | 2013 | 23563236 | 32098966 | index patient | MDS | F | 30 | normal | non-caseating granulomas, low NK count, low B cell count, monocytopenia | verrucae palmaris, verrucae plantaris | bronchiectasis, fibrotic changes, nodular pulmonary lesions, pleural effusion | ||||
P0088 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | familial | 2013 | 23563236 | 32098966 | index patient | MDS | F | 30 | normal | non-caseating granulomas, low NK count, low B cell count, monocytopenia | verrucae palmaris, verrucae plantaris | bronchiectasis, fibrotic changes, nodular pulmonary lesions, pleural effusion | ||||
P0089 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | familial | 2013 | 23563236 | 32098966, 29375553 | index patient (patient II-9) father | MDS, EBV+ peripheral T-cell NHL | M | NA | monosomy 7 | EBV | ||||||
P0089 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | familial | 2013 | 23563236 | 32098966, 29375553 | index patient (patient II-9) father | MDS, EBV+ peripheral T-cell NHL | M | NA | monosomy 7 | EBV | ||||||
P0090 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2014 | 24077845 | 24227816, 25359990, 23502222, 21892162, 25111582, 34529785 | 35.III.3/1 | MDS-RCMD | M | 32 | trisomy 8 | low NK count, low B cell count, monocytopenia | ground glass infiltrates, reticular infiltrates | |||||
P0091 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2014 | 24077845 | 23502222, 24227816, 34529785 | 25.II.1/ 2 | MDS-RCMD | M | 34 | normal | HPV | Y | ASXL1, PTPN11, SMC1A, STAG2 | ||||
P0092 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2014 | 24077845 | 24227816, 20040766, 28642594 | 3.I.1/ 8/ Kindred 3 | CMML, MonoMAC, LGL | F | 49 | NA | B, T, NK cell low, monocytopenia | ASXL1 | |||||
P0093 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2014 | 24077845 | 24227816, 20040766, 21670465, 28642594, 27169477, 29375553 | 1.II.1/4A/ Kindred 1.II.1 | MonoMac, CMML | F | 40 | normal | fever, low NK count, low B cell count, monocytopenia | genital HPV, herpatic esophagitis, EBV, post HSCT viral infection | Y | dyspnea, bronciolitis obliterans, respiratory failure | ASXL1 | ||
P0094 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2014 | 24077845 | 30578959, 24227816, 23502222, 20040766, 23365458, 30578959, 37406166, 34529785 | 4.I.1R/ 4.I.1/Patient ID#24W / 6 / Family_4_1/ 97 | CMML, LGL | M | 78 | normal | HPV | TET2, TET2, TET2 | |||||
P0095 | c.243delinsGC | p.Gly82fsX? | frameshift_variant | Novel | LPAT | de novo | 2014 | 24077845 | 21670465, 24227816, 25359990, 23502222, 20040766, 21816832, 8701948, 34529785 | 8.I.1/ Kindred 8/ 7/ Patient 1 | MDS-RCMD | M | 30 | normal | B, NK cell low, monocytopenia | HPV | Y | DNMT3A, STAG2 | |||
P0096 | c.1083_1094del | p.Arg361del4ArgAsnAlaAsn | inframe_deletion | Novel | LPAT | unknown | 2014 | 24077845 | 20040766, 21670465, 24227816, 25359990, 23365458, 34089740, 34529785 | 12.I.1/ Patient 2/ 10/ Kindred 12/ 4 | MDS-RCMD | M | 28 | monosomy 7, trisomy 8, trisomy 21 | B, T, NK cell low, monocytopenia | severe perineal HPV, HCV with cirrhosis | Y | ASXL1 | |||
P0097 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2014 | 24077845 | 24227816, 25359990, 23502222, 20040766 | 13/11.II.1 | MDS-RCUD | F | 31 | normal | B, NK cell low, monocytopenia | HPV, VZV | ASXL1 | ||||
P0098 | c.1113C>G | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2014 | 24077845 | 20040766, 21670465, 24227816 | 10.I.1/ 14/ Kindred 10 | MDS-RAEB1, AML, MonoMAC | F | 37 | monosomy 7, marker chromosome | B, T, NK cell low, monocytopenia, lupus-like symptoms | ASXL1 | |||||
P0099 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2014 | 24077845 | 21670465, 24227816, 30578959, 8701948, 28642594, 34089740 | 16/ Kindred 18/ 18.I.2/ Patient ID#12W | MDS-RCMD, MonoMac | F | 16 | trisomy 8 | B, T, NK cell low, monocytopenia | Y | ASXL1 | ||||
P0100 | c.1018-1G>A | p.? (r.340_381del) | splice_acceptor_variant | Novel | PAT | unknown | 2014 | 24077845 | 24227816, 25359990, 21670465 | 24.I.1/18/ Kindred 24 | MDS-RCMD, LGL | F | 44 | der(22)t(1;22)(q12;p13)/der(15)t(1;15)(q12;p13) | B, T, NK cell low, monocytopenia | HPV, VZV | Y | ASXL1 | |||
P0101 | c.302del | p.Gly101fsX? | frameshift_variant | Novel | PAT | unknown | 2014 | 24077845 | 24227816, 23365458, 23502222, 34529785 | 26.I.1/ Patient 7/19/ 7 | CMML, MDS, AML | F | 22 | monosomy 7, trisomy 8, del(11)(q13q23) | low B cell count | disseminated CMV, CMV gastroduodenitis, HSV2 | ASXL1, CBL, DNMT3A | ||||
P0102 | c.1116_1130del | p.Cys373del5 | inframe_deletion | Novel | LPAT | familial | 2014 | 24077845 | 24227816 | 34.II.1/20C | MDS | M | 15 | monosomy 7 | |||||||
P0103 | c.1116_1130del | p.Cys373del5 | inframe_deletion | Novel | LPAT | unknown | 2014 | 24077845 | 24227816, 34529785 | 34.I.1R/21C/ 9 | MDS | F | 50 | normal | |||||||
P0104 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2014 | 24077845 | 23502222, 24227816, 28642594 | 40.I.1R/40.I.1/ 22 | asymptomatic | M | 55 | normal | low B cell count | ||||||
P0105 | c.1099dup | p.Asp367GlyfsX15 | frameshift_variant | Novel | PAT | familial | 2014 | 24077845 | 24227816, 25359990 | 33.III.1/ 23A | MDS-RCMD | F | 17 | normal | low NK count, low B cell count, monocytopenia | Y | ASXL1 | ||||
P0106 | c.1-276T>G | p.= | regulatory_region_variant | Novel | VUS | familial | 2014 | 24077845 | 24227816 | 33.III.3R/24A | asymptomatic | NA | 9 | NA | monocytopenia | ||||||
P0106 | c.1099dup | p.Asp367GlyfsX15 | frameshift_variant | Novel | PAT | familial | 2014 | 24077845 | 24227816 | 33.III.3R/24A | symptomatic | F | 10 | normal | monocytopenia | ||||||
P0107 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2014 | 24077845 | 24227816, 23502222, 23365458, 20040766, 22996659 | 6.II.1/ Patient 5/ 25 | MDS-RCMD | F | 26 | normal | B, NK cell low, monocytopenia | perineal HPV | Y | ||||
P0108 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2014 | 24077845 | 30578959, 25359990, 24227816, 28642594, 34089740 | 31.II.1/26D/ Patient ID#6W | MDS-RCMD | M | 31 | normal | low NK count, low B cell count, monocytopenia, sarcoidosis-like pulmonary process | HPV | STAG2 | ||||
P0109 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2014 | 24077845 | 24227816, 25359990, 28642594, 34529785 | 31.II.2R/27D/ 10 | MDS-RCMD | M | 29 | normal | low NK count, low B cell count, monocytopenia | STAG2 | |||||
P0110 | c.586_593dup | p.Gly199LeufsX21 | frameshift_variant | Novel | PAT | unknown | 2014 | 24077845 | 30578959, 24227816, 23502222, 34529785 | 27.I.1/ 28/ Patient ID#10W/ 11 | MDS | F | 46 | 9q deletion | HPV | Y | ASXL1 | ||||
P0111 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | de novo | 2014 | 24077845 | 30578959, 24227816, 25359990, 28825694, 27169477, 29375553, 34529785 | 30E/Patient ID#7W/39.I.1/ 13 | MDS-RCMD | F | 25 | trisomy 8 | fever, low NK count, low B cell count, low T cell count, monocytopenia | skin HPV, genital HPV, HSV, EBV, herpes stomatitis | STAG2 | ||||
P0112 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | de novo | 2014 | 24077845 | 30578959, 24227816, 25359990, 28825694, 27169477, 29375553, 34529785 | 31E/ Patient ID#8W/39.I.2/ 12 | MDS-RCMD | F | 25 | trisomy 8 | fever, low NK count, low B cell count, low T cell count, monocytopenia | HPV, HSV, EBV, molluscum contagiosum, herpes stomatitis | Y | ASXL1 | |||
P0113 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | de novo | 2014 | 24077845 | 20040766, 21670465, 24227816, 25359990, 23365458, 23502222, 34089740, 34529785 | 15.I.1/32/ Patient 6/ Kindred 15/ 14 | MDS-RCMD | F | 13 | trisomy 8, marker chromosome | B, NK cell low, monocytopenia | HSV | Y | STAG2 | |||
P0114 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2014 | 24077845 | 34 | MDS | M | 15 | monosomy 7 | ||||||||
P0115 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2014 | 24077845 | 24227816, 25359990, 20040766, 21670465, 23502222 | 9.III.1/ Kindred 9/ 35 | MDS-RCMD, MonoMac | M | 22 | normal | B, NK cell low, monocytopenia | HPV | |||||
P0116 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2022 | 34529785 | 34089740 | 9.II.1 | MDS | M | 22 | normal | BCOR, SRSF2, STAG | ||||||
P0117 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 9.III.2 | asymptomatic | M | NA | normal | ||||||||
P0118 | c.1017+512C>T | p.= | regulatory_region_variant | Novel | VUS | unknown | 2014 | 24077845 | 23502222 | 36 / 28.I.1 | MDS | F | 24 | normal | B, NK cell low, monocytopenia | CMV pneumonia | ASXL1 | ||||
P0119 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | de novo | 2014 | 24077845 | 24227816, 23502222, 34529785 | 37.I.1/37/ 92 | MDS-RCMD | F | 26 | normal | B, T, NK cell low, monocytopenia | Y | DNMT3A, FLT3 | ||||
P0120 | c.1123C>T | p.Leu375Phe | missense_variant | Novel | LPAT | familial | 2014 | 24359037 | 24077845 | 38 / Saudi Arabian man | MonoMac, MDS | M | 24 | normal | intermittent fever, small bowel inflammation, splenic inflammation, peritoneal inflammation, granulomatous inflammation, low NK count, low B cell count, monocytopenia, inverse CD4:CD8 ratio | generalized verrucosis, HPV | Y | ||||
P0121 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2014 | 24077845 | 24227816, 23502222 | 30.II.1/40B | symptomatic | F | 43 | normal | B, NK cell low, monocytopenia | HSV, HPV | Y | PAP | |||
P0122 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2014 | 24077845 | 41 | NA | M | 77 | normal | ||||||||
P0123 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | de novo | 2014 | 24077845 | 23502222, 24227816, 25359990, 34529785 | 42/41.I.1/ 18 | MDS-RCMD, Emberger-syndrome | F | 44 | monosomy 7 | B, NK cell low, monocytopenia | HSV | Y | ASXL1, DNMT3A, SMC1A | |||
P0124 | c.793_802del | p.Phe265fsX? | frameshift_variant | Novel | LPAT | unknown | 2014 | 24077845 | 44 | MDS | M | 26 | normal | ||||||||
P0125 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | de novo | 2014 | 24077845 | 30578959, 24227816, 27169477, 28642594, 29375553, 34089740 | 14.I.1/46 | MDS, DCML | F | 7 | normal | low B, NK cells, monocytopenia | EBV, HSV | reticular CT pattern | ||||
P0126 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2014 | 24077845 | 24227816, 21670465, 8701948, 25359990, 20040766, 21816832, 28642594, 34089740 | 21.II.1/47/ Kindred 21 | MDS-RCMD, MonoMac | M | 33 | deletion of chromosome Y | B, T, NK cell low, monocytopenia | skin HPV, mulloscum contagiosum, MCV | Y | ||||
P0127 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2014 | 24077845 | 25359990, 34529785 | 48/50/ 146.I.1 | MDS-RAEB1 | M | 31 | normal | DNMT3A, STAG2 | ||||||
P0128 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2014 | 24227816 | 34529785 | 4.III.1R/ 96 | symptomatic | M | 30 | NA | Y | ||||||
P0129 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24227816 | 28642594, 34529785 | 17.II.2/ 98 | asymptomatic | M | 5 | NA | |||||||
P0130 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 17.II.1 | G2BMID | M | NA | normal | STAG2 | |||||||
P0131 | c.1116_1130del | p.Cys373del5 | inframe_deletion | Novel | LPAT | familial | 2014 | 24077845 | 24227816, 25359990, 34089740, 34529785 | 34.II.2R/34.II.2/20C/ 8 | MDS-RCUD | M | 14 | monosomy 7 | low NK count, low B cell count, monocytopenia | STAG2 | |||||
P0132 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | unknown | 2014 | 24227816 | 23502222 | 30.I.1 | GATA2 deficiency | M | 65 | NA | HPV | ||||||
P0133 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2014 | 24227816 | 30.II.4 | symptomatic | F | 30 | NA | HPV | |||||||
P0134 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2014 | 24227816 | 28642594 | 40.II.1 | MDS-RCMD | M | 18 | trisomy 8 | HPV, VZV | ||||||
P0135 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2014 | 24227816 | 28642594 | 40.II.2 | MDS-RCMD | M | 16 | trisomy 8 | HPV | ||||||
P0136 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2014 | 24227816 | 28642594 | 40.II.3 | MDS-RCMD | M | 14 | trisomy 8 | HPV, VZV | ||||||
P0137 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2014 | 24345756 | 28642594 | 3.II.6 | MDS, DCML | F | 34 | NA | monocytopenia | HPV | respiratory pathology | ||||
P0138 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 28642594 | 3.III.3 | asymptomatic | F | 26 | NA | |||||||
P0139 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | unknown | 2014 | 24345756 | 6.I.1 | symptomatic | NA | 18 | NA | autoimmunity | HPV | Y | respiratory pathology | ||||
P0140 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | familial | 2014 | 24345756 | 6.II.1 | MDS | NA | 17 | NA | monocytopenia | |||||||
P0141 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | familial | 2014 | 24345756 | 6.II.2 | symptomatic | NA | 13 | NA | HPV | |||||||
P0142 | c.318_319insT | p.Ser106fsX? | frameshift_variant | Novel | PAT | unknown | 2014 | 24345756 | 7.I.1 | symptomatic | NA | 10 | NA | HPV | respiratory pathology | ||||||
P0143 | c.318_319insT | p.Ser106fsX? | frameshift_variant | Novel | PAT | familial | 2014 | 24345756 | 7.II.1 | symptomatic | F | 10 | NA | HPV | Y | ||||||
P0144 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 8.I.2 | asymptomatic | F | 62 | NA | ||||||||
P0145 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 8.I.3 | symptomatic | M | 25 | monosomy 7 | HPV | |||||||
P0146 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 29295841 | 8.II.1 | MDS, AML | M | 36 | NA | granulomatous hepatitis, inverted CD4/CD8 ratio, low IgM levels, lymphocytopenia, monocytopenia, low APC cell counts | HPV | Y | emphysema | |||
P0147 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 8.II.4 | asymptomatic | M | 32 | NA | ||||||||
P0148 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 8.II.5 | asymptomatic | M | 29 | NA | ||||||||
P0149 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 4508672, 28642594 | 9.III.1 | MDS | F | 31 | NA | monocytopenia | HPV | Y | respiratory pathology | |||
P0150 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 4508672, 28642594 | 9.III.2 | DCML | F | 29 | NA | HPV | ||||||
P0151 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 4508672, 28642594 | 9.III.3 | asymptomatic | M | 22 | NA | |||||||
P0152 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 4508672, 28642594 | 9.III.4 | symptomatic | M | 17 | NA | |||||||
P0153 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24345756 | 4508672, 28642594 | 9.III.5 | MDS | F | 17 | trisomy 8 | autoimmunity | ||||||
P0154 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2014 | 24345756 | 21765025 | 1.I.1 | symptomatic | NA | 60 | trisomy 8 | autoimmunity | respiratory pathology | |||||
P0155 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2011 | 21242295 | 21765025, 24345756, 29295841, 36727400 | 14.II.2 / 5 | MDS | M | 30 | NA | monocytopenia, lymphocytopenia; reverse CD4:CD8 ratio; low APC counts; low IgM levels | HPV | Y | PAP | GATA2, ASXL1 | ||
P0156 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 24726394 | Patient 1 | symptomatic | M | 3 | NA | IgG deficiency, IgA deficiency, low NK count, low B cell count, lowT cell count, monocytopenia, abnormal vaccine response | HPV | Y | bronchiectasis | ||||
P0157 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2014 | 24726394 | Patient 2 | symptomatic | F | 48 | NA | low NK count, low B cell count, low T cell count,monocytopenia, low IgG level | |||||||
P0158 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2014 | 24782121 | Patient 1 | MDS-RAEB2, AML, monoMAC | M | 35 | trisomy 8 | HPV | Y | EZH2, GATA1, HECW2 | |||||
P0159 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2014 | 25111582 | MRD 2 | MDS-RCMD | F | 46 | NA | low NK count, low B cell count, monocytopenia | skin HPV, VZV | Y | PAP | ||||
P0160 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2014 | 25111582 | URD 5 | MDS-RCMD | M | 33 | deletion of chromosome Y | low NK count, low B cell count, monocytopenia | skin HPV, molluscum contagiosum | Y | |||||
P0161 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2014 | 25111582 | UCB 9 | MDS-RAEB2, AML | F | 41 | monosomy 6, +r | low NK count, low B cell count, monocytopenia | skin HPV, genital HPV | Y | PAP | ||||
P0162 | c.892dup | p.Cys298LeufsX86 | frameshift_variant | Novel | PAT | familial | 2015 | 26022708 | Family 1 - Patient 1 | MDS, MonoMac | NA | NA | trisomy 8, der(1;7)(q10;p10) | ||||||||
P0163 | c.892dup | p.Cys298LeufsX86 | frameshift_variant | Novel | PAT | familial | 2015 | 26022708 | Family 1 - Patient 2 | MDS, MonoMac | NA | NA | trisomy 8,der(1;7)(q10;p10) | GATA2, RUNX1 | |||||||
P0164 | c.802G>T | p.Gly268X | stop_gained | Novel | PAT | familial | 2015 | 26022708 | Family 2 - Patient 4 | MDS-RCMD, Emberger-syndrome | NA | NA | monosomy 7 | NRAS, TP53, WT1 | |||||||
P0165 | c.1018-2A>G | p.? | splice_acceptor_variant | Novel | PAT | familial | 2015 | 26022708 | Family 3 - Patient 5 | MDS | NA | NA | monosomy 7 | ASXL1, SETBP1 | |||||||
P0166 | c.1018-2A>G | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2015 | 26022708 | Family 3 - Patient 6 | Emberger-syndrome | F | NA | NA | Y | |||||||
P0167 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 5 / Family 1 P1 (IV-2) | AML | M | 38 | trisomy 1, der(1;21), (q10;q10), trisomy 8 | NK deficiency, B cell deficiency | HPV, CMV | progressive dyspnea | ASXL1, DNMT3A, ETV6 | |||
P0168 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 7 / Family 1 P2 (IV-4) | MDS | F | 35 | normal | NK deficiency, B cell deficiency | HPV, CMV | ASXL1 | ||||
P0169 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 4 / Family 1 P3 (V-1) | MDS | F | 10 | normal | NK deficiency, B cell deficiency | HPV, CMV | |||||
P0170 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 6 / Family 1 P4 (V-3) | Emberger-syndrome, aplastic anemia, MDS | M | 7 | normal | NK deficiency, B cell deficiency | HPV, CMV | Y | pulmonary stenosis | ASXL1 | ||
P0171 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 2 / Family 1 (III-8) | MDS | F | 56 | normal | |||||||
P0172 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 3 / Family 1 (IV-3) | suboptimal NK cell function | F | 30 | NA | NK deficiency | ASXL1 | |||||
P0173 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2015 | 25619630 | 31246134 | 1 / Family 1 (IV-9) | asymptomatic | F | 35 | normal | |||||||
P0174 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2015 | 25879889 | Caucasian Family-oldest son | GATA2 deficiency | M | 17 | NA | fever, low B cell count, monocytopenia , vasculitis | EBV | diffuse parenchymal lung disease,bronchiectasis, peribronchitis, fibrotisation, subpleural cystic remodeling, emphysema, caugh, dyspnea | |||||
P0175 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2015 | 25879889 | Caucasian Family-youngest son | GATA2 deficiency | M | 13 | NA | monocytopenia | |||||||
P0176 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2015 | 25879889 | Caucasian Family-Father | GATA2 deficiency | M | 45 | NA | low B cell count, bilateral ankylosing spondylitis (HLA-B27 positive) | |||||||
P0177 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2015 | 25239263 | FH-181 | MDS | F | 22 | trisomy 8 | ||||||||
P0178 | c.1078T>A | p.Trp360Arg | missense_variant | Novel | PAT | familial | 2015 | 25239263 | CH-119 | symptomatic | M | 12 | trisomy 8 | pulmonary hemorrhage, bronchiolitis obliterans | |||||||
P0179 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2015 | 26492932 | 28642594 | 1003-001 | MDS, AML | F | 33 | NA | |||||||
P0180 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2015 | 26492932 | 28642594 | 1003-003 | AML | M | 68 | normal | HNRNPK, RUNX1 | ||||||
P0181 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2016 | 27013649 | UPN4 RCC | MDS-RCC | NA | 17 | monosomy 7 | chronic active EBV | |||||||
P0182 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2016 | 27013649 | UPN5 ID/RCC | immunodeficiency | NA | 17 | normal | HPV, CMV | interstitial lung desease, lung insufficiency | ||||||
P0183 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2016 | 27013649 | UPN6 RCC | MDS-RCC | NA | 17 | monosomy 7 | ||||||||
P0184 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2016 | 27013649 | UPN7 ID/ RCMD in adulthood | MDS-RCMD | NA | 17 | monosomy 7 | HLA-B27 | EBV | interstitial lung desease | |||||
P0185 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2016 | 27013649 | UPN8 FS | symptomatic | M | NA | normal | ||||||||
P0186 | c.917G>A | p.Trp306X | stop_gained | Novel | PAT | unknown | 2016 | 27416790 | P1 | AML, MDS | M | 16 | monosomy 7 | HPV | Y | ||||||
P0187 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2016 | 27416790 | P2 | MDS | M | 11 | monosomy 7 | monocytopenia | plantar HPV, recurrent mouth aphtous ulcers | Y | |||||
P0188 | c.302del | p.Gly101fsX? | frameshift_variant | Novel | PAT | familial | 2016 | 27418648 | HIP08919 | MDS | M | 12 | NA | ||||||||
P0189 | c.1017+2T>C | p.? (r.Ser340AlafsX49) | splice_donor_variant | Novel | PAT | unknown | 2016 | 27418648 | HIP17707 | MDS | M | 14 | NA | ||||||||
P0190 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2016 | 27418648 | HIP18921 | MDS | F | 6 | NA | ||||||||
P0191 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2016 | 27418648 | 28642594 | HIP18952 | MDS | F | 10 | NA | |||||||
P0192 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2016 | 27418648 | HIP20476 | MDS | F | 16 | NA | ||||||||
P0193 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2017 | 28947108 | 28747912 | Patient 1 / Patient 4 | GATA2 deficiency, BM aplasia | F | 37 | NA | low B cell count, low NK count | genital HPV, skin HPV, CMV | Y | bronchiectasis, chronic lung disease of unknown origin | |||
P0194 | c.952G>A | p.Ala318Thr | missense_variant | Novel | VUS | familial | 2017 | 28066994 | Patient 1 | MDS | F | 10 | trisomy 8 | monocytopenia | |||||||
P0195 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2017 | 28825694 | Twin 1 | MDS | F | 27 | trisomy 8 | absence of NK cells, absence of B cells, monocytopenia, low CD3 count | EBV mononucleosis, persistent EBV viremia, genital HPV, skin HPV | Y | |||||
P0196 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | familial | 2017 | 28825694 | Twin 2 | MDS | F | 27 | trisomy 8 | absence of NK cells, absence of B cells, monocytopenia, low CD3 count | EBV mononucleosis, persistent EBV viremia, genital HPV, skin HPV, Herpes varicella Zoster infection | ||||||
P0197 | c.1018-1G>A | p.? (r.340_381del) | splice_acceptor_variant | Novel | PAT | unknown | 2017 | 29296959 | BMF41 | MDS-RCC, AML | F | 9 | monosomy 7 | RUNX1, SETBP1, IKZF1 | |||||||
P0198 | c.1018-2A>C | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2017 | 29296959 | BMF67 | MDS-RCC | M | 15 | normal | ||||||||
P0199 | c.1144-1G>C | p.? | splice_acceptor_variant | Novel | LPAT | unknown | 2017 | 29296959 | BMF109 | MDS-RCC | F | 5 | monosomy 7 | ||||||||
P0200 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | de novo | 2017 | 29296959 | BMF129 | MDS-RCC | F | 8 | monosomy 7 | ||||||||
P0201 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2017 | 27680514 | son (III-1) | MonoMac, MDS | M | 18 | trisomy 8 | STAG2 | |||||||
P0202 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2017 | 27680514 | father (II-1) | MonoMac, MDS | M | 17 | NA | STAG2, BCOR, FANCA | |||||||
P0203 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | familial | 2017 | 28259234 | NA | GATA2 deficiency | M | 9 | NA | HPV | Y | ||||||
P0204 | c.130G>T | p.Glu44X | stop_gained | Novel | PAT | unknown | 2017 | 28271814 | I-1 | asymptomatic | F | 33 | NA | ||||||||
P0205 | c.130G>T | p.Glu44X | stop_gained | Novel | PAT | familial | 2017 | 28271814 | II-5 | asymptomatic | M | 6 | NA | ||||||||
P0206 | c.130G>T | p.Glu44X | stop_gained | Novel | PAT | familial | 2017 | 28271814 | 24167460 | II-1 | symptomatic | M | 13 | NA | hypogammaglobulinaemia | recurrent HPV | Y | ||||
P0207 | c.130G>T | p.Glu44X | stop_gained | Novel | PAT | familial | 2017 | 28271814 | 24167460 | II-2 | AML | F | 12 | NA | unspecified hepatitis | chickenpox, HPV | Y | chronic cough | |||
P0208 | c.130G>T | p.Glu44X | stop_gained | Novel | PAT | familial | 2017 | 28271814 | 24167460 | II-4 | symptomatic | M | 8 | NA | HPV | Y | |||||
P0209 | c.1079G>T | p.Trp360Leu | missense_variant | Novel | LPAT | unknown | 2017 | 29146883 | UB023 | MDS | M | 21 | monosomy 7 | ||||||||
P0210 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2017 | 29146883 | UB040 | MDS-RAEB | F | 14 | tri(8),del20q | ||||||||
P0211 | c.423C>A | p.Tyr141X | stop_gained | Novel | PAT | familial | 2017 | 29146883 | UB064 | MDS | F | 16 | monosomy 7 | TERC | |||||||
P0212 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2017 | 29146883 | UB076 | aplastic anemia | M | 7 | monosomy 7 | ||||||||
P0213 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2017 | 29146883 | UB097 | MDS, MonoMac | M | 8 | monosomy 7 | ||||||||
P0214 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2017 | 29146883 | UB105 | aplastic anemia | M | 13 | NA | ||||||||
P0215 | c.229+13_229+14insGCC | p.? | splice_region_variant | Novel | VUS | familial | 2018 | 29724903 | P2* | MDS | F | 19 | trisomy 8 | skin HPV, genital HPV | |||||||
P0216 | c.229+13_229+14insGCC | p.? | splice_region_variant | Novel | VUS | unknown | 2018 | 29724903 | P2 (mother) | MDS | F | 44 | normal | dermo-hypodermitis, rheumatism | genital HPV | ||||||
P0217 | c.437del | p.Gly146ValfsX72 | frameshift_variant | Novel | PAT | familial | 2018 | 29724903 | 36727400 | P6* / 55 | immunodeficiency, MDS | F | 17 | normal | EBV, HPV | STAG2, STAG2, STAG2, STAG2, STAG2, STAG2 | |||||
P0218 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2018 | 29724903 | P16* | MDS | NA | 22 | der(Y)t(Y;1)(q11.23;q21) | cutaneous HPV | |||||||
P0219 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2018 | 29724903 | P16 (brother) | NA | M | 32 | NA | ||||||||
P0220 | c.1018_1028del | p.Ser340LysfsX40 | frameshift_variant | Novel | PAT | unknown | 2018 | 29724903 | P17* | MDS | NA | 10 | normal | Y | |||||||
P0221 | c.1018_1028del | p.Ser340LysfsX40 | frameshift_variant | Novel | PAT | familial | 2018 | 29724903 | P17 (daughter) | symptomatic | F | 9 | NA | ||||||||
P0222 | c.1023del | p.Ala342ProfsX45 | frameshift_variant | Novel | PAT | familial | 2018 | 29724903 | 33417088 | P19* | symptomatic | NA | 11 | normal | cutaneous and genital HPV | Y | |||||
P0223 | c.1023del | p.Ala342ProfsX45 | frameshift_variant | Novel | PAT | familial | 2018 | 29724903 | 33417088 | P19 (sister) | symptomatic | F | 11 | normal | skin HPV | Y | |||||
P0224 | c.1076T>C | p.Leu359Ser | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400 | P25* / 38 | MDS | NA | 61 | del(5)(q2?3q 3?3) | Y | ASXL1, CBL, TET2 | |||||
P0225 | c.1077_1082dup | p.Trp360_Arg361dup | inframe_insertion | Novel | LPAT | familial | 2018 | 29724903 | P26 (daughter) | asymptomatic | F | 10 | NA | ||||||||
P0226 | c.1085G>C | p.Arg362Pro | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400 | P34* / 74 | MDS, AML | M | 17 | trisomy 8 | skin HPV, genital HPV, HBV | NRAS, PTPN11, SF3B1, SMC1A, TP53 | |||||
P0227 | c.1085G>C | p.Arg362Pro | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | P34 (brother) | MDS, AML | M | 17 | monosomy 7 | dermo-hypodermitis | Y | ||||||
P0228 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P37* | MDS | F | 42 | trisomy 8 | dermo-hypodermitis, arthritis | Y | ||||||
P0229 | c.1154C>A | p.Pro385Gln | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400 | P42* / 52 | MDS | F | 18 | normal | Poncet's disease | genital HPV | Y | Y | |||
P0230 | c.1154C>A | p.Pro385Gln | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | P42 (sister) | MDS | F | 17 | normal | skin HPV, genital HPV | Y | ||||||
P0231 | c.1154C>A | p.Pro385Gln | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400 | P42 (son) / 51 | asymptomatic | M | 15 | NA | |||||||
P0232 | c.1154C>A | p.Pro385Gln | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | P42 (sister) | T-ALL | F | 24 | monosomy 7 | rheumatoid purpura | |||||||
P0233 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400 | P45* (sister) / 69 | immunodeficiency, MDS, AML | F | 9 | monosomy 7, monosomy 21 | KRAS, PTPN11, SETBP1 | ||||||
P0234 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400, 39497062 | P45 (brother) / 70 | MDS, HLH? | M | 7 | monosomy 7 | HLH? | SETBP1 | |||||
P0235 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | unknown | 2018 | 29724903 | 33417088, 39497062 | P48* | MDS, HLH | NA | 19 | normal | Y | ||||||
P0236 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2018 | 29724903 | 36727400 | P48 (son) / 19 | asymptomatic | M | 13 | NA | |||||||
P0237 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2018 | 29724903 | 36727400 | P48 (daughter) / 20 | asymptomatic | F | 6 | NA | |||||||
P0238 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2018 | 30232126 | 1 | AML-MRC | M | 21 | monosomy 7, trisomy 13 | NRAS | |||||||
P0239 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2018 | 30232126 | 1 mother | asymptomatic | F | 64 | NA | SETBP1 | |||||||
P0240 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | familial | 2018 | 30232126 | 2 | MDS | M | 13 | monosomy 7 | HPV | |||||||
P0241 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | familial | 2018 | 30232126 | 2 identical twin | MDS | M | 31 | NA | loss of monocytes, loss of B cells, loss of B cell precursors, loss of NK cells | HPV | lung infiltrates | STAG2 | ||||
P0242 | c.1018-50_1143+247del | p.? | splice_acceptor_variant | Novel | PAT | familial | 2018 | 30232126 | 3A | MDS | F | 15 | NA | ||||||||
P0243 | c.1018-50_1143+247del | p.? | splice_acceptor_variant | Novel | PAT | familial | 2018 | 30232126 | 3B | MDS | F | 18 | monosomy 18, trisomy 22 | CMV (POST HSCT) | |||||||
P0244 | c.1018-50_1143+247del | p.? | splice_acceptor_variant | Novel | PAT | familial | 2018 | 30232126 | 34529785 | 3A 3B sibling #1 / 333.II.3 | AML, MDS | M | 29 | trisomy 8, deletion 7q | Y | DNMT3A, STAG2, STAG2 | |||||
P0245 | c.1018-50_1143+247del | p.? | splice_acceptor_variant | Novel | PAT | familial | 2018 | 30232126 | 3A 3B sibling #2 | MDS | M | 51 | trisomy 8 | loss of monocytes, loss of B cells, loss of B cell precursors, loss of NK cells | HPV | Y | |||||
P0246 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2018 | 29156497 | Patient 1 | MDS | F | 28 | trisomy 1q | severe monocytopenia | recurrent herpes labialis, genital HPV | ||||||
P0247 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2018 | 29412158 | MRD 2 | MDS | F | 29 | trisomy 21, trisomy 1q | genital HPV,VZV | |||||||
P0248 | c.1116_1130del | p.Cys373del5 | inframe_deletion | Novel | LPAT | familial | 2018 | 29412158 | URD 2 | MDS | M | 17 | monosomy 7 | skin HPV, genital HPV | |||||||
P0249 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | familial | 2018 | 29412158 | URD 4 | MDS | M | 22 | normal | skin HPV, genital HPV | Y | ||||||
P0250 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2018 | 29412158 | URD 5 | MDS | M | 18 | normal | skin HPV, genital HPV | Y | ||||||
P0251 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2018 | 29412158 | URD 8 | MDS | M | 33 | normal | skin HPV, genital HPV | |||||||
P0252 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2018 | 29412158 | URD 9 | MDS | F | 24 | normal | genital HPV | Y | ||||||
P0253 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2018 | 29412158 | URD 11 | MDS | F | 38 | monosomy 13, trisomy 1q, deletion of chromosome X | genital HPV, HCV | Y | ||||||
P0254 | c.1128C>A | p.Tyr376X | stop_gained | Novel | PAT | familial | 2018 | 29412158 | 34529785 | URD 12 / 50.II.2/ 38 | MDS | F | 18 | normal | skin HPV, genital HPV | Y | PAH | STAG2 | |||
P0255 | c.1128C>A | p.Tyr376X | stop_gained | Novel | PAT | familial | 2022 | 34529785 | 34469508 | 50.II.1/ 39 / P10 | MDS | M | 23 | der(1;7)(q10;p10), trisomy 8 | HPV | Y | STAG2 | ||||
P0256 | c.988G>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2018 | 29412158 | Haplo 2 | MDS | F | 27 | trisomy 8 | genital HPV | Y | ||||||
P0257 | c.988G>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2018 | 29412158 | Haplo 3 | MDS | F | 27 | trisomy 8 | skin HPV, genital HPV | |||||||
P0258 | c.1019_1020insCGACTGGGAGGGCAAGGCAG | p.Ala341AspfsX53 | frameshift_variant | Novel | LPAT | unknown | 2018 | 29189513 | Patient 1 | Emberger-syndrome | F | 9 | normal | low B cell count, low NK count | HPV | Y | |||||
P0259 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2018 | 29588856 | P1 (1 family) | aplastic anemia, GATA2 deficiency | F | 19 | NA | chronic inflammation, low B cell count; absence of dendritic cells in PB; monocytopenia | diffuse aphtous-like ulcers | ||||||
P0260 | c.1187G>T | p.Arg396Leu | missense_variant | Novel | PAT | unknown | 2018 | 29882021 | P1 | MDS | M | 30 | NA | monocytopenia, low NK cell count, low B cell count | severe H1N1 (ARDS) | ||||||
P0261 | c.1187G>T | p.Arg396Leu | missense_variant | Novel | PAT | familial | 2018 | 29882021 | P2 | MDS | M | 15 | NA | low B-cell count, monocytopenia | severe H1N1 (ARDS) | ||||||
P0262 | c.1187G>T | p.Arg396Leu | missense_variant | Novel | PAT | familial | 2018 | 29882021 | P3 | symptomatic | F | 17 | NA | low B-cell count, monocytopenia, low NK count, SLE-like syndrome | genital herpes, flu-like pneumonia, CMV | Focal alveolar proteinosis, interstitial lung fibrosis | |||||
P0263 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2018 | 30030275 | Patient 1 | symptomatic | F | 48 | normal | recurrent fever, systemic inflammation, monocytopenia, low B cell count, low NK count, low dendritic cell count, low CD4+ T cell count | HPV, HCV | Y | PAP | ||||
P0264 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2018 | 30030275 | Patient 2 (pedigree III-1) | AML | F | 22 | monosomy 7 | respiratory syncytial virus infection | |||||||
P0265 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2019 | 30578959 | 1 | MDS | F | 23 | normal | monocytopenia, lymphopenia | HPV | Y | Y | ASXL1 | |||
P0266 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2019 | 30578959 | 2 | MDS | F | 37 | trisomy 1q, loss of X, trisomy 8 | monocytopenia, lymphopenia | HPV | Y | MLL, ASXL1 | ||||
P0267 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2019 | 30578959 | 3 | MDS | M | 23 | normal | monocytopenia, lymphopenia | HPV | Y | PAP | BCOR | |||
P0268 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2019 | 30578959 | 4 | MDS | F | 44 | trisomy 8 | monocytopenia, lymphopenia | HPV | DNMT3A | |||||
P0269 | c.802G>T | p.Gly268X | stop_gained | Novel | PAT | unknown | 2019 | 30578959 | 9 | MDS | F | 53 | 13q deletion | monocytopenia, lymphopenia | HPV | Y | PAP | STAG2, MLL | |||
P0270 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2019 | 30578959 | 11 | MDS | F | 28 | normal | monocytopenia, lymphopenia | HPV | Y | Y | ASXL1 | |||
P0271 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2019 | 30578959 | 14 | GATA2 deficiency related bone marrow and immunodeficiency disorder | M | 17 | normal | monocytopenia | HPV | ||||||
P0272 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2019 | 30578959 | 15 | GATA2 deficiency related bone marrow and immunodeficiency disorder | F | 23 | normal | monocytopenia, lymphopenia | HPV | ||||||
P0273 | c.1021G>C | p.Ala341Pro | missense_variant | Novel | VUS | unknown | 2019 | 30578959 | 16 | GATA2 deficiency related bone marrow and immunodeficiency disorder | M | 25 | normal | monocytopenia, lymphopenia | HPV | ||||||
P0274 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2019 | 30578959 | 17 | GATA2 deficiency related bone marrow and immunodeficiency disorder | M | 41 | trisomy 8 | monocytopenia, lymphopenia | HPV | Y | ASXL1 | ||||
P0275 | c.1036G>A | p.Gly346Ser | missense_variant | Novel | VUS | unknown | 2019 | 30578959 | Patient ID#18 | GATA2 deficiency related bone marrow and immunodeficiency disorder | M | 20 | normal | monocytopenia, lymphopenia | |||||||
P0276 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2019 | 30578959 | 19 | asymptomatic | F | 60 | normal | ||||||||
P0277 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2019 | 30578959 | 20 | asymptomatic | F | 31 | normal | ||||||||
P0278 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2019 | 30578959 | 21 | asymptomatic | F | 51 | normal | ||||||||
P0279 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2019 | 30578959 | 22 | symptomatic | M | 54 | normal | lymphopenia | |||||||
P0280 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2019 | 30578959 | 23 | symptomatic | M | 61 | normal | HPV | CEBPA | ||||||
P0281 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2019 | 30578959 | 25 | symptomatic | M | 7 | normal | ||||||||
P0282 | c.58C>T | p.Gln20X | stop_gained | Novel | PAT | familial | 2019 | 30802360 | NA | T-cell precursor ALL, GATA2 deficiency | F | 8 | dic(21;22)(p11.2;p11.2) | fever, monocytopenia, lymphopenia, low immunoglobulin levels, absent B cells, low NK count, CD4/CD8 inversion | verruca plantaris, viral meningitis (treatment complication) | ||||||
P0283 | c.1123C>T | p.Leu375Phe | missense_variant | Novel | LPAT | unknown | 2019 | 31245276 | Patient 1 | MDS, GATA2 deficiency, AML | F | 25 | trisomy 8, trisomy 20 | lymphocytopenia, monocytopenia, low CD3+/CD4+ T cell count, low CD19+ B cell count, low NK count; absent dendritic cells, inverted CD4:CD8 ratio, atypical myeloid maturation pattern | varicella | Y | NRAS | ||||
P0284 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2019 | 31035956 | 43-year-old white male | MDS-RAEB2, MonoMac | M | 43 | NA | chronic granulomatous pleuritis, night fevers, granulomatous inflammation of the thyroid gland, granulomatous splenic inflammation, ankle and knee arthritis, monocytopenia, erythema nodosum, vasculitis | Y | bilateral pleural effusion, respiratory distress | |||||
P0285 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2019 | 31035956 | son 2 | asymptomatic | M | 21 | NA | ||||||||
P0286 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2019 | 31035956 | son 1 | asymptomatic | M | 28 | NA | ||||||||
P0287 | c.17_18del | p.Glu6AlafsX178 | frameshift_variant | Novel | PAT | unknown | 2019 | 31033783 | 17-year-old boy | MDS, MonoMac | M | 17 | normal | fever, organizing pneumonitis, low T cell count, monocytopenia, low NK count, low B cell count, inverse CD4:CD8 ratio, vasculitis | Y | asthma, reticulonodular infiltrates, decreased bibasilar breath sounds | |||||
P0288 | c.(16bp tandem repeat in exon 4) | p.Thr347fsX? | frameshift_variant | Novel | PAT | familial | 2019 | 30564229 | 39497062 | Patient 2 | HLH, GATA2 deficiency | M | 7 | NA | fever, HLH, low CD4 T cell count, low B cell count, low NK count, mild hypogammaglobulinemia, slight reduction in degranulation of NK cells, monocytopenia | VZV, EBV | caugh | ||||
P0289 | c.(16bp tandem repeat in exon 4) | p.Thr347fsX? | frameshift_variant | Novel | PAT | unknown | 2019 | 30564229 | Patient 3 (Mother patient 2) | symptomatic | F | NA | NA | low peripheral blood B cell count, low peripheral blood NK count, monocytopenia | |||||||
P0290 | c.1021del | p.Ala341ProfsX46 | frameshift_variant | Novel | PAT | unknown | 2019 | 30697248 | Patient 1 | GATA2 deficiency | M | 24 | NA | fever, monocytopenia, lymphocytopenia, low NK cell count | West Nile virus encephalitis, HPV | Y | |||||
P0291 | c.956_962del | p.Cys319SerfsX5 | frameshift_variant | Novel | PAT | familial | 2019 | 31106410 | P1 | MonoMac | M | 12 | NA | persistent fever, monocytopenia, lymphocytopenia, low NK cell count | Y | ||||||
P0292 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2019 | 31106410 | P2 | MonoMac, low risk MDS | F | 20 | NA | persistent fever, monocytopenia, lymphocytopenia, low NK cell count | HPV | Y | |||||
P0293 | c.956_962del | p.Cys319SerfsX5 | frameshift_variant | Novel | PAT | unknown | 2019 | 31106410 | father of P1 | asymptomatic | M | 48 | NA | ||||||||
P0294 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2019 | 31106410 | father of P2 | asymptomatic | M | 55 | NA | ||||||||
P0295 | c.821del | p.Phe274fsX? | frameshift_variant | Novel | PAT | familial | 2019 | 31309983 | 20 | AML-MRC | M | 18 | monosomy 7, trisomy 8 | monocytopenia | |||||||
P0296 | c.610C>T | p.Arg204X | stop_gained | Novel | PAT | unknown | 2019 | 31309983 | 48 | AML-MRC | M | 6 | monosomy 7 | monocytopenia | |||||||
P0297 | c.1085G>A | p.Arg362Gln | missense_variant | Novel | PAT | familial | 2019 | 31309983 | 105 | MDS | M | 57 | normal | ||||||||
P0298 | c.706A>G | p.Met236Val | missense_variant | 2.705E-05 | VUS | familial | 2019 | 31309983 | 236 | AML-MRC, β-thalassemia, pure erythroid leukemia | M | 30 | complex karyotype | ||||||||
P0299 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2019 | 31309983 | 275 | bone marrow and immunodeficiency disorder | F | 44 | normal | monocytopenia, lymphopenia | cervical HPV | Y | |||||
P0300 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2019 | 31309983 | 337 | MDS | F | 31 | trisomy 8 | panniculitis, monocytopenia, low B cell count, low NK count | HPV | Y | |||||
P0301 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2019 | 31753093 | 11-year-old girl | Emberger-syndrome, MDS, AML | F | 11 | NA | Y | |||||||
P0302 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2019 | 30714451 | Patient | MDS | F | 27 | trisomy 8 | AAK1, ZNF117, ZNF680, KMT2D, ABCC6, ZNF208, ZNF253, ZNF675, PLCG1 | |||||||
P0303 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2019 | 30714451 | Twin sister | symptomatic | F | 27 | NA | ZNF273, ZNF135, ZNF253, ZNF708, ZNF276, ZNF814, ZNF91 | |||||||
P0304 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2019 | 32914014 | Patient 1 | GATA2 deficiency | M | 24 | normal | panniculitis, no monocytes, low NK count, low B cell count | HPV | ||||||
P0305 | heterozygous deletion that included at least exon 2 of the GATA2 gene | heterozygous deletion that included at least exon 2 of the GATA2 gene | transcript_ablation | Novel | PAT | unknown | 2019 | 32914014 | Patient 2 | AML | F | 36 | t(2;12)(p21;p13) | fever, monocytopenia | chronic EBV | Y | CEBPA, NPM1, STAG2, NRAS | ||||
P0306 | c.1034_1035insTCTTCTTGTGGCGGCTCTTCTGGCGGC | p.Ala345delinsAlaLeuLeuValAlaAlaLeuLeuAlaAla | inframe_insertion | Novel | LPAT | familial | 2020 | 32286542 | 37406166 | III-1 / Family_00B5.046 | GATA2 deficiency | F | 29 | trisomy 8, der(1;15)(q10;q10) | low NK count, low CD4+ T cell count | HPV | Y | ||||
P0307 | c.1034_1035insTCTTCTTGTGGCGGCTCTTCTGGCGGC | p.Ala345delinsAlaLeuLeuValAlaAlaLeuLeuAlaAla | inframe_insertion | Novel | LPAT | unknown | 2020 | 32286542 | 37406166 | II-1 / Family_00B5.047 | symptomatic | F | 50 | NA | monocytopenia | ||||||
P0308 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2020 | 32098966 | FML018 index case (III.1) | AML | F | 17 | NA | ||||||||
P0309 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2020 | 32098966 | FML018 asymptomatic father | asymptomatic | M | NA | NA | ||||||||
P0310 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2020 | 32098966 | FML019 | MDS | F | 36 | trisomy 8 | Y | |||||||
P0311 | c.1121G>A | p.Gly374Asp | missense_variant | Novel | VUS | unknown | 2020 | 32497548 | Patient 1 | GATA2 deficiency | F | 20 | NA | panniculitis, monocytopenia, low B cell count, hyper-IgE, elevated ANA antibody, elevated antiphosphatidylserine IgG antibody, elevated IgM antibody, elevated soluble CD25 level | Y | ||||||
P0312 | c.1041del | p.Cys348ValfsX39 | frameshift_variant | Novel | PAT | de novo | 2014 | 10.14785 | 28234738 | Case report / Patient 1 | MDS, Emberger-syndrome | F | 4 | monosomy 7 | intermittent neutropenia | plantar HPV | Y | Y | |||
P0313 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2010 | 20040766 | 21670465, 28642594 | 5.III.1 | AML blast crisis | M | 17 | NA | recurrent HPV | ||||||
P0314 | c.1023_1026dup | p.Arg344fsX? | frameshift_variant | Novel | PAT | familial | 2020 | 32865708 | Brother | AML | M | 15 | monosomy 7 | fever, low B cell count, low NK count, monocytopenia | dry caugh | ||||||
P0315 | c.1023_1026dup | p.Arg344fsX? | frameshift_variant | Novel | PAT | familial | 2020 | 32865708 | Sister | MDS | F | 21 | normal | EBV | shortness of breath on excercising | ||||||
P0316 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32488879 | 37406166 | IV-4 / Family_40499.001 | MDS, AML | F | 19 | monosomy 7 | Low NK coun, low B cell cunt, monocytopenia | SETBP1 | |||||
P0317 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32488879 | IV-6 | symptomatic | M | 25 | NA | low NK count | |||||||
P0318 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32488879 | III-2 | symptomatic | F | 59 | NA | low NK count | Y | ||||||
P0319 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32488879 | IV-1 | symptomatic | F | NA | NA | monocytopenia, low B cell count, low CD8 T cell count, low NK count | Y | ||||||
P0320 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32488879 | IV-2 | symptomatic | M | 18 | NA | ||||||||
P0321 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32488879 | III-4 | MDS | M | NA | normal | monocytopenia, low NK count, low CD4 T cell count, low B cell count | |||||||
P0322 | c.1341C>A | p.Ser447Arg | missense_variant | Novel | PAT | unknown | 2024 | 39614632 | 36-year-old woman | AML-MRC | F | 36 | 42,XX,del(3)(q12),-5,add(7)(q32),-11,-13,-16,-17,del(20)(q11.2),+mar,inc [3]/46,XX[17] | TP53, STAG2 | |||||||
P0323 | c.1017G>T | p.Leu339Leu (r.Ser340ValfsX48) | splice_donor_variant | Novel | PAT | familial | 2020 | 32556286 | Patient 1 | MDS | F | 17 | monosomy 7, trisomy 8 | ||||||||
P0324 | c.1017G>T | p.Leu339Leu (r.Ser340ValfsX48) | splice_donor_variant | Novel | PAT | familial | 2020 | 32556286 | Patient 2 | MDS | F | 42 | trisomy 8 | ||||||||
P0325 | c.1061C>A | p.Thr354Lys | missense_variant | Novel | LPAT | familial | 2020 | 32556286 | Patient 3 | MDS | F | 22 | normal | Y | pulmonary fibrosis | ||||||
P0326 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2020 | 32556286 | Patient 4 | MDS | F | 32 | normal | genital HPV, EBV | |||||||
P0327 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2020 | 32556286 | Patient 5 | MDS | F | 33 | normal | panniculitis | HPV, HSV | ||||||
P0328 | c.1021del | p.Ala341ProfsX46 | frameshift_variant | Novel | PAT | unknown | 2020 | 32556286 | Patient 6 | MDS, Emberger-syndrome | M | 13 | normal | HPV | |||||||
P0329 | c.1150del | p.Arg384GlyfsX3 | frameshift_variant | Novel | PAT | unknown | 2020 | 32556286 | Patient 7 | MDS, mediastinal T cell lymphoma | M | 14 | normal | lupus pernio | Y | ||||||
P0330 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2020 | 32556286 | Patient 8 | MDS | M | 39 | trisomy 8, t(1;7)(q10;p10) | ||||||||
P0331 | c.1072A>C | p.Thr358Pro | missense_variant | Novel | LPAT | unknown | 2020 | 32655615 | AM01 | AML | M | 48 | NA | fever | BCOR, CBL, CSF3R, EZH2, RUNX1 | ||||||
P0332 | c.1072A>C | p.Thr358Pro | missense_variant | Novel | LPAT | unknown | 2020 | 32655615 | AM03 | AML | M | 58 | NA | fever | BCOR, KIT | ||||||
P0333 | c.535A>T | p.Lys179X | stop_gained | Novel | PAT | familial | 2020 | 32718260 | 16-year-old nonwhite boy | AML | M | 16 | NA | HPV | |||||||
P0334 | 3.1-3.3 Mb het del encompassing GATA2 | 3.1-3.3 Mb het del encompassing GATA2 | transcript_ablation | Novel | PAT | de novo | 2017 | 29296959 | BMF52 | MDS-RCC, AML | M | 12 | monosomy 7 | CRLF2 | |||||||
P0335 | whole gene deletion | whole gene deletion | transcript_ablation | Novel | PAT | unknown | 2017 | 29146883 | UB101 | MDS | M | 19 | normal | ||||||||
P0336 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2016 | 26748574 | Patient 1 | Emberger-syndrome, DCML deficiency, MDS-RCMD | M | 13 | normal | monocyte deficiency, B cell deficiency, dendritic cell deficiency, normal NK cell proportion, monocytopenia | Y | Y | |||||
P0337 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2016 | 26748574 | Father of Patient 1 | Emberger-syndrome, DCML deficiency, MDS-RCMD | M | 38 | del(7q), trisomy 8 | monocyte deficiency, B cell deficiency, dendritic cell deficiency, normal NK cell proportion, monocytopenia | Y | ||||||
P0338 | uniallelic expression of GATA2 | uniallelic expression of GATA2 | transcript_ablation | Novel | PAT | unknown | 2013 | 23502222 | 29156497, 24227816 | 29.I.1 | MDS, AML | F | 45 | trisomy 8 | PAP | ||||||
P0339 | c.610C>T | p.Arg204X | stop_gained | Novel | PAT | unknown | 2019 | 31279773 | 19-year-old man | MDS, EBV-positive PBL | M | 19 | monosomy 7 | fever, lymphocytopenia, monocytopenia, lupus-like syndrome | H1N1, rhinovirus, EBV | Y | respiratory dystress, left pleuritic chest pain | STAG2 | |||
P0340 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2019 | 30933029 | 17-year-old male individual | MDS | M | 17 | NA | ||||||||
P0341 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2019 | 31322613 | 40-year-old man (father) | MDS | M | 33 | NA | monocytopenia, low B cell count, low NK cell count | anal condylomata, HPV | Y | PAP | ||||
P0342 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2019 | 31322613 | 10-year-old son | symptomatic | M | 4 | NA | ||||||||
P0343 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2019 | 31322613 | 18-year-old son | MDS | M | 16 | NA | herpers zoster | |||||||
P0344 | NA | p.Arg337ThrfsX45 | frameshift_variant | Novel | LPAT | unknown | 2020 | 32643807 | Indian male | MDS | M | 20 | normal | neutropenic fever, monocytopenia, low B cell count, low NK count, low CD4+ T cell count, inverse CD4:CD8 ratio | Y | Y | |||||
P0345 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | Family A III.1 | MDS | M | 19 | trisomy 8 | lymphopenia, monocytopenia, low B cell count, low T cell count, low NK count | verrucae | Y | bronchial hyperresponsiveness | ||||
P0346 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | Family A III.2 | symptomatic | F | 16 | normal | low NK count | verrucae | ||||||
P0347 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | Family A III.3 | symptomatic | F | 13 | normal | low B cell count, low NK count, monocytopenia, erythema nodosum | verrucae | ||||||
P0348 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | 36268026 | Family A III.4 / P01 | MDS | F | 22 | partial duplication of chromosome 1 | fever, chronic interstitial pulmonary inflammation , low B cell count, low T cell count, low NK count, monocytopenia, erythema nodosum | verrucae | PAP, caugh, dyspnea, interstitial lung fibrosis | ||||
P0349 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | 36268026 | Family A III.5 / P02 | MDS-EB2, AML | M | 22 | monosomy 7, trisomy 8 | low B cell count, low NK count, monocytopenia | verrucae | Y | persistent pneumothorax | |||
P0350 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | Family A II.3 | MDS | M | 53 | trisomy 8 | colitis ulcerosa, monocytopenia, lymphocytopenia, low B cell count, low T cell count, low NK count, , vasculitis | verrucae, recurrent viral infections, EBV, HSV | interstitial lung desease, dyspnea, lung infiltrates | |||||
P0351 | c.1117_1119delinsGGG | p.Cys373Gly | inframe_insertion | Novel | LPAT | familial | 2020 | 32682923 | Family A II.2 | symptomatic | F | 52 | normal | low B cell count, low T cell count, low NK count, monocytopenia, erythema nodosum | verrucae | ||||||
P0352 | c.1085G>A | p.Arg362Gln | missense_variant | Novel | PAT | unknown | 2020 | 32682923 | Family B I.1 | symptomatic | M | 67 | NA | psoriasis | |||||||
P0353 | c.1085G>A | p.Arg362Gln | missense_variant | Novel | PAT | familial | 2020 | 32682923 | Family B II.2 | symptomatic | F | 43 | NA | ||||||||
P0354 | c.1085G>A | p.Arg362Gln | missense_variant | Novel | PAT | familial | 2020 | 32682923 | Family B II.3 | symptomatic | M | 39 | NA | ||||||||
P0355 | c.1085G>A | p.Arg362Gln | missense_variant | Novel | PAT | familial | 2020 | 32682923 | Family B III.1 | AML, chloroma | M | 18 | NA | ASXL1 | |||||||
P0356 | c.1085G>A | p.Arg362Gln | missense_variant | Novel | PAT | familial | 2020 | 32682923 | Family B III.2 | AML | F | 15 | NA | ||||||||
P0357 | 5'UTR deletion | 5'UTR deletion | transcript_ablation | Novel | PAT | unknown | 2014 | 24077845 | 29 | MDS | F | 48 | trisomy 8 | ||||||||
P0358 | c.857C>T | p.Ala286Val | frameshift_variant | Novel | PAT | familial | 2017 | 28104920 | 29365323, 37406166 | 6 / 30 / Family_0148.041 | CMML, sAML, MDS | F | 41 | NA | NRAS, NRAS, ASXL1, EZH2 | ||||||
P0359 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2021 | 34469508 | 40664679 | A029 | MDS-RCC | M | 12.1 | der(1;7), monosomy 7, monosomy 22 | Y | RUNX1 | |||||
P0360 | c.303del | p.Ala103GlnfsX16 | frameshift_variant | Novel | PAT | unknown | 2016 | 26702063 | 34469508 | A044 | MDS-RCC | F | 12.4 | der(1;7), +mar | Y | ||||||
P0361 | c.1018-11_1027del | p.? | splice_acceptor_variant | Novel | LPAT | unknown | 2016 | 26702063 | A056 | MDS-RAEB | M | 16.1 | monosomy 7 | ASXL1, SETBP1 | |||||||
P0362 | c.1021del | p.Ala341ProfsX46 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | A098 | MDS-EB | M | 12.7 | monosomy 7 | EZH2, SETBP1 | |||||||
P0363 | c.968dup | p.His323GlnfsX61 | frameshift_variant | Novel | LPAT | unknown | 2016 | 26702063 | B002 | MDS-RCC (RAEB) | M | 14.5 | monosomy 7 | Y | ASXL1, SETBP1 | ||||||
P0364 | c.1046G>T | p.Cys349Phe | missense_variant | Novel | LPAT | de novo | 2016 | 26702063 | B032 | MDS-RAEBt | F | 12.7 | monosomy 7 | bronchial asthma | SETBP1 | ||||||
P0365 | c.1066_1095del | p.Thr356_Asp365del | inframe_deletion | Novel | LPAT | de novo | 2016 | 26702063 | CZ041 | MDS-RCC (RAEB) | M | 15.7 | monosomy 7 | ||||||||
P0366 | c.1035_1038dup | p.Thr347ArgfsX38 | frameshift_variant | Novel | PAT | de novo | 2016 | 26702063 | CZ053 | MDS-RAEB | M | 4.4 | monosomy 7 | recurrent respiratory tract infections (not specified) | ASXL1, NF1, SETBP1 | ||||||
P0367 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2016 | 26702063 | CZ054 | MDS-RCC | M | 16.9 | monosomy 7 | ||||||||
P0368 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2016 | 26702063 | CZ057 | MDS-RAEB (MDR-AML) | M | 17.4 | monosomy 7 | ASXL1, EZH2, PTPN11, RUNX1, SETBP1 | |||||||
P0369 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2016 | 26702063 | 34469508, 40664679 | CZ061 | MDS-RCC | M | 17.5 | normal (later monosomy 7) | |||||||
P0370 | c.222_229+6delins21 | p.? | splice_region_variant | Novel | VUS | de novo | 2016 | 26702063 | 27013649, 40664679 | CZ087 | MDS-RCC | M | 11.4 | monosomy 7, trisomy 8 | Y | ||||||
P0371 | c.393_399del | p.Gly132LeufsX84 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | CZ101 | MDS-RCC | M | 12.2 | monosomy 7 | HPV | Y | Y | ASXL1, SETBP1 | ||||
P0372 | c.689_711dup | p.Thr238AlafsX4 | frameshift_variant | Novel | PAT | familial | 2025 | 40664679 | CZ110 | MDS-EB/AML | F | 10.9 | normal | ||||||||
P0373 | c.689_711dup | p.Thr238AlafsX4 | frameshift_variant | Novel | PAT | familial | 2025 | 40664679 | CZ121 | MDS-RCC | F | 14.7 | monosomy 7 + add (trisomy 8) | ||||||||
P0374 | c.627_630dup | p.Val211ArgfsX72 | frameshift_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D076 | MDS-RCC (RAEB) | M | 12.5 | monosomy 7 | SETBP1, STAG2 | ||||||
P0375 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | D147 | MDS-RCC (RAEB) | M | 14.2 | monosomy 7 + add | ASXL1 | ||||||
P0376 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | D151 | MDS-RCC (MDR-AML) | F | 16.0 | trisomy 8 +add | recurrent respiratory tract infections (not specified) | STAG2 | |||||
P0377 | c.1054T>G | p.Cys352Gly | missense_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D184 | MDS-RAEB (MDR-AML) | F | 8.8 | monosomy 7 | HPV | ETV6, EZH2, SETBP1, SETBP1, TET2 | |||||
P0378 | c.1110C>G | p.Cys370Trp | missense_variant | Novel | VUS | unknown | 2016 | 26702063 | 40664679 | D245 | MDS-RAEBt | M | 8.7 | monosomy 7 | Y | IKZF1 | |||||
P0379 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2016 | 26702063 | 40664679 | D271 | MDS-RAEB | M | 12.5 | monosomy 7 | RPL10 | ||||||
P0380 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | D314 | MDS-RAEB | F | 10.7 | monosomy 7 + add | arthritis | ASXL1, ASXL1, JAK2, SETBP1, WAS | |||||
P0381 | c.416_417del | p.Ser139CysfsX45 | frameshift_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | D342 | MDS-RCC | M | 16.6 | monosomy 7 | ulcerative colitis | ||||||
P0382 | c.207_208del | p.Val70LeufsX114 | frameshift_variant | Novel | PAT | unknown | 2016 | 26702063 | 34469508, 40664679 | D350 | MDS-RAEB | M | 11.0 | der(1;7), trisomy 8 | HPV | Y | RUNX1, EZH2 | ||||
P0383 | c.1341C>A | p.Ser447Arg | missense_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | D415 | MDS-RAEB | F | 13.6 | monosomy 7 | B/NK-cell lymphopenia | recurrent upper respiratory tract infections, herpes labialis | ASXL1, RUNX1, SETBP1 | ||||
P0384 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D418 | MDS-RAEBt | M | 7.3 | monosomy 7 | bronchial asthma | RUNX1 | |||||
P0385 | del3q21.2–21.3 (3.6Mb) | del3q21.2–21.3 (3.6Mb) | transcript_ablation | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | D420 | MDS-RCC/RAEB-t | F | 15.0 | monosomy 7 | Hashimoto thyroiditis | Y | |||||
P0386 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2016 | 26702063 | 28642594, 40664679 | D427 | MDS-RAEB | F | 12.9 | monosomy 7 + add | allergy, eosinophilia, elevated IgE | RUNX1 | |||||
P0387 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | D429 | MDS-RCC | F | 16.3 | normal | STAG2 | ||||||
P0388 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D479 | MDS-RCC | F | 16.8 | normal | hypogammaglobulinemia, Low IgG, low IgA | ASXL1 | |||||
P0389 | c.1017+1del | p.? | splice_donor_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D492 | MDS-RCC (RAEB) | M | 17.4 | monosomy 7 | gastroenteritis (not classified) | ||||||
P0390 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | D522 | MDR-AML | F | 11.7 | monosomy 7 + add | ||||||||
P0391 | c.1031_1049del | p.Arg344LysfsX37 | frameshift_variant | Novel | PAT | de novo | 2016 | 26702063 | 40664679 | D569 | MDS-RCC | F | 10.3 | normal | B/NK-cell lymphopenia | HPV | Y | bronchial asthma | |||
P0392 | c.1017+532T>A | p.= | regulatory_region_variant | Novel | VUS | unknown | 2016 | 26702063 | 40664679 | D609 | MDS-RCC | M | 3.1 | normal | upper respiratory tract infection | respiratory distress (not specified) | |||||
P0393 | c.685del | p.Leu229CysfsX5 | frameshift_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D612 | MDS-RCC | M | 7.5 | monosomy 7 | recurrent upper respiratory tract infections | bronchial asthma, stridor | SETBP1 | ||||
P0394 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2016 | 26702063 | 28642594, 40664679 | D621 | MDS-RCC | M | 15.9 | monosomy 7 | inverted CD4/CD8 ratio, hypogammaglobulinemia, Low IgA, inverted CD4/8 ratio, B-cell lymphopenia | ||||||
P0395 | c.1018-10_1037del | p.? | splice_acceptor_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | D680 | MDS-RCC | M | 12.1 | monosomy 7 | inverted CD4/CD8 ratio, inverted CD4/8 ratio, B-cell lymphopenia | HPV | SETBP1, STAG2 | ||||
P0396 | c.981G>A | p.Gly327Gly | synonymous_variant | Novel | VUS | unknown | 2023 | 38067298 | 40664679 | D722 | MDS-RCC | M | 10.7 | normal | |||||||
P0397 | c.303del | p.Ala103GlnfsX16 | frameshift_variant | Novel | PAT | de novo | 2016 | 26702063 | 40664679 | D726 | MDS-RAEB | F | 9.6 | monosomy 7 | EBV, recurrent oral aphthae | ASXL1, ASXL1, SETBP1, WAS | |||||
P0398 | c.306del | p.Ala103GlnfsX17 | frameshift_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D731 | MDS-EB | F | 5.2 | monosomy 7 + add | inverted CD4/CD8 ratio, inverted CD4/8 ratio, B-cell lymphopenia | recurrent upper respiratory tract infections | bronchial asthma | SETBP1 | |||
P0399 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2020 | 32555368 | 40664679 | D749 | MDS-EB | F | 14.2 | monosomy 7 | ASXL1, KMT2C, KRAS | ||||||
P0400 | c.1113C>G | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | D762 | MDS-RAEBt | M | 9.7 | monosomy 7 | dyspnea | KRAS, STAG2 | |||||
P0401 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | unknown | 2016 | 26702063 | 38067298, 40664679 | D770 | MDS-RAEB | F | 10.2 | monosomy 7 + add | suspected autoimmune disease (+ANA, SMA, SP100 antibodies) | prolonged viral infections | ASXL1, ASXL1, CBL, MYB, SETBP1 | ||||
P0402 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | D794 | MDS-RCC (RAEB) | F | 6.1 | monosomy 7 + add | recurrent fever | recurrent oral aphthae | |||||
P0403 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2016 | 26702063 | 38067298, 34469508, 28642594, 40664679 | D801 | MDS-RCC | M | 15.6 | normal (later monosomy 7) | inverted CD4/CD8 ratio, hypogammaglobulinemia, Low IgG, low IgA, T-/B-/NK-lymphopenia, inverted CD4/8 ratio | Y | KRAS | ||||
P0404 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2025 | 40664679 | sister of D801 | AML | F | 16.9 | trisomy 8 | inverted CD4/CD8 ratio, hypogammaglobulinemia, Low IgG, inverted CD4/8 ratio, no B cells, low T cells | STAG2 | ||||||
P0405 | c.1018-10_1037del | p.? | splice_acceptor_variant | Novel | PAT | familial | 2016 | 26702063 | 38067298, 40664679 | D807 | MDS-RCC | M | 13.7 | normal | HPV | ||||||
P0406 | c.932_937delinsG | p.Thr311ArgfsX71 | frameshift_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | D907 | MDS-RAEB (MDR-AML) | F | 7.5 | monosomy 7 | adenovirus | ||||||
P0407 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | D955 | MDS-RAEBt | F | 11.4 | monosomy 7 | SETBP1 | ||||||
P0408 | c.1017+582G>T | p.= | regulatory_region_variant | Novel | VUS | familial | 2016 | 26702063 | 40664679 | D983 | MDS-RCC | M | 13.4 | normal | |||||||
P0409 | c.1128C>G | p.Tyr376X | stop_gained | Novel | PAT | de novo | 2016 | 26702063 | 38067298, 40664679 | D1010 | MDS-RCC | M | 12.7 | normal | hypogammaglobulinemia, B/NK-cell lymphopenia, monocytopenia, Low IgG | Varicella after vaccination | Y | Y | |||
P0410 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | familial | 2016 | 26702063 | 38067298, 40664679 | D1064 | MDS-EB | F | 6.5 | monosomy 7 | |||||||
P0411 | c.1143+1G>A | p.? | splice_donor_variant | Novel | PAT | de novo | 2016 | 26702063 | 38067298, 40664679, 29146900 | D1072 / P16 | MDS-RCC | F | 16.2 | monosomy 7 | SETBP1 | ||||||
P0412 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2016 | 26702063 | 38067298, 40664679 | D1119 | MDS-RCC | F | 15.1 | trisomy 8 | juvenile idiopathic arthritis, panniculitis | HPV, recurrent upper respiratory tract infections | |||||
P0413 | c.1045T>A | p.Cys349Ser | missense_variant | Novel | LPAT | familial | 2016 | 26702063 | 38067298, 40664679 | D1140 | MDS-RCC | M | 10.2 | normal (trisomy 8 in 2016) | inverted CD4/CD8 ratio, Low CD4/CD8, B-lymphopenia, erythema nodosum | ||||||
P0414 | c.1045T>A | p.Cys349Ser | missense_variant | Novel | LPAT | familial | 2016 | 26702063 | 38067298, 40664679 | D1141 | MDS-RCC | M | 16.3 | normal | inverted CD4/CD8 ratio, Low CD4/CD8, B-lymphopenia | STAG2 | |||||
P0415 | c.1045T>A | p.Cys349Ser | missense_variant | Novel | LPAT | familial | 2025 | 40664679 | brother of D 1140 & D 1141 | NK-lymphopenia | M | 6.5 | normal | NK-lymphopenia, low ratio of transitional and naive B-cells, low plasmocytoid DC | |||||||
P0416 | c.1023C>T | p.Ala341Ala | synonymous_variant | 2.029E-05 | VUS | unknown | 2020 | 32555368 | 40664679 | D1142 | MDS-RCC | M | 11.6 | monosomy 7 | SAMD9 | ||||||
P0417 | c.1037_1046del | p.Gly346ValfsX38 | frameshift_variant | Novel | PAT | familial | 2023 | 38067298 | 40664679 | D 1144 | MDS-RCC | F | 12.1 | normal (trisomy 8 in 2015) | autoimmune cytopenia (ANA+) | HPV, recurrent oral aphthae | Y | Y | |||
P0418 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2025 | 40664679 | D 1238 | MDS-RCC | M | 7.5 | monosomy 7, add(tris8) | ||||||||
P0419 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32555368 | 38067298, 38993648, 40664679 | D 1239 / Case 1 | MDS-RCC | F | 12.4 | monosomy 7 | hypogammaglobulinemia, no mDCs, no pDCs, B-lymphopenia, reduced transitional and naive B-cells, monocytopenia, low IgG count, arthritis, bursitis, tendosynovitis | Y | chronic caugh | ||||
P0420 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2020 | 32555368 | 40664679 | sister of D 1239 | B/NK-cell lymphopenia | F | 10.7 | NA | hypogammaglobulinemia, mild hypogammaglobunemia, B/NK-cell lymphopenia | ||||||
P0421 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2025 | 40664679 | CCI: mother of P61 & P62 | immunodeficiency, lung disease | F | 48.0 | normal | inverted CD4/CD8 ratio, B/NK-cell lymphopenia, reduced naive and transitional B-cells, low CD4+ cells, monocytopenia, reduced dendritic cells, elevated complement turnoover (Cd3 elevated) | HPV, hepatitis C, Bronchitis | Y | PAP, ARDS | ||||
P0422 | c.371del | p.Thr124SerfsX94 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | D1246 | MDS-EB | F | 16.4 | normal | ||||||||
P0423 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2023 | 38067298 | 40664679 | D1302 | MDS-EB | M | 14.6 | monosomy 7 | ASXL1, ETV6, ETV6, PTPN11, SETBP1 | ||||||
P0424 | c.303del | p.Ala103GlnfsX16 | frameshift_variant | Novel | PAT | unknown | 2023 | 38067298 | 40664679 | D1319 | MDR-AML | F | 16.3 | monosomy 7, add(tris13) | GATA1, WT1 | ||||||
P0425 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | D1353 | MDR-AML | F | 9.8 | monosomy 7 | ||||||||
P0426 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2025 | 40664679 | D1370 | MDS-RCC | F | 17.4 | trisomy 8 | EBV | STAG2, STAG2 | ||||||
P0427 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2023 | 38067298 | 40664679 | D1372 | MDS-RCC | F | 9.9 | normal | connatal CMV infection | Y | STAT3 | ||||
P0428 | c.1109G>T | p.Cys370Phe | missense_variant | Novel | VUS | unknown | 2023 | 38067298 | 38993648, 40664679 | D1428 / Case 3 | MDS-RCC | M | 17.0 | trisomy 8 | hypogammaglobulinemia, hypogammaglobulinemia, B-/NK-cell deficiency | HPV, recurrent herpes labialis | |||||
P0429 | c.341del | p.Asp114ThrfsX5 | frameshift_variant | Novel | LPAT | unknown | 2023 | 38067298 | 40664679 | D1443 | MDS-RCC | M | 9.9 | monosomy 7 | HPV | ||||||
P0430 | whole gene deletion | whole gene deletion | transcript_ablation | Novel | PAT | unknown | 2025 | 40664679 | D1483 | MDS-RCC | F | 18.3 | trisomy 8 | inverted CD4/CD8 ratio, B/NK/T-lymphopenia, low CD4/CD8 ratio, erythema nodosum | recurrent respiratory infections (not specified) | STAG2 | |||||
P0431 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2025 | 40664679 | D1500 | MDS-RCC | M | 16.1 | normal | ||||||||
P0432 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2023 | 38067298 | 40664679 | D1504 | MDS-RCC | M | 3.9 | monosomy 7 | Y | Y | |||||
P0433 | c.416_417del | p.Ser139CysfsX45 | frameshift_variant | Novel | PAT | unknown | 2023 | 38067298 | 40664679 | D1521 | MDS-EB/ MDR-AML | M | 12.7 | monosomy 7, add(t(5;12)) | bronchial asthma | CSF3R, SETBP1 | |||||
P0434 | c.1143+1G>A | p.? | splice_donor_variant | Novel | PAT | unknown | 2025 | 40664679 | D1531 | MDS-RCC | M | 13.6 | normal | HPV | |||||||
P0435 | c.448G>T | p.Gly150X | stop_gained | Novel | PAT | familial | 2023 | 38067298 | 40664679 | D1542 | MDS-RCC/MDS-EB? (progress after 2 wks) | F | 10.7 | monosomy 7 | ASXL1 | ||||||
P0436 | c.448G>T | p.Gly150X | stop_gained | Novel | PAT | familial | 2025 | 40664679 | D1543 | MDS-RCC | M | 6.9 | normal | ||||||||
P0437 | c.1055G>A | p.Cys352Tyr | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | D1554 | MDS/MPN | F | 4.7 | monosomy 7 | ASXL1, KRAS, RUNX1, SETBP1 | |||||||
P0438 | c.1243G>A | p.Glu415Lys | missense_variant | Novel | VUS | unknown | 2016 | 26702063 | 34469508, 40664679 | DK014 (old SC021) | MDS-RAEB (MDR-AML) | F | 13.7 | trisomy 8 | Y | KRAS, NRAS, PHF6 | |||||
P0439 | c.956_962del | p.Cys319SerfsX5 | frameshift_variant | Novel | PAT | familial | 2025 | 40664679 | DK099 | MDS-EB | F | 10.9 | monosomy 7 | ||||||||
P0440 | c.802G>T | p.Gly268X | stop_gained | Novel | PAT | familial | 2016 | 26702063 | 40664679 | I112 | MDS-RAEB | F | 17.1 | trisomy 8 | |||||||
P0441 | c.1018-2A>T | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | I126 | MDS-RCC (RAEB) | F | 5.1 | monosomy 7 | ASXL1, SETBP1 | ||||||
P0442 | c.970_994dup | p.Leu332GlufsX60 | frameshift_variant | Novel | PAT | familial | 2016 | 26702063 | 40664679 | I198 | MDS-RCC | M | 18.6 | monosomy 7 | ASXL1, EZH2 | ||||||
P0443 | c.1124del | p.Leu375ProfsX12 | frameshift_variant | Novel | PAT | de novo | 2016 | 26702063 | 40664679 | I199 | MDS-RAEBt | M | 7.8 | monosomy 7 | B-lymphopenia | Y | ASXL1, IKZF1, PHF6 | ||||
P0444 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2016 | 26702063 | 40664679 | I301 | MDS-EB | M | 10.7 | monosomy 7 | B-lymphopenia, vasculitis | VZV | Y | SETBP1 | |||
P0445 | c.161C>A | p.Ser54X | stop_gained | Novel | PAT | unknown | 2016 | 26702063 | 38067298, 40664679 | I305 | MDS-RAEBt, AML | M | 18.1 | monosomy 7 | |||||||
P0446 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2016 | 26702063 | 38067298, 40664679 | I306 | MDS-RCC | M | 14.3 | normal | |||||||
P0447 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2023 | 38067298 | 40664679 | I309 | MDS-RCC | M | 17.3 | normal | secondary immunodeficiency (deficiency of early phases of maturation of B, T and NK lymphocytes in PB. In bone marrow deficiency of CD34+ precursors with presence of more mature cells - B lymphocytes and plasma cells) | VZV complicated by DIC/ pneumonia/ hepatitis | STAG2 | ||||
P0448 | c.414_417del | p.Ser139CysfsX78 | frameshift_variant | Novel | PAT | de novo | 2016 | 29906059 | 40664679, 38067298, 37837580 | I312 / Patient 1 (P14) | MDS-RCC, Emberger-syndrome | M | 10.9 | trisomy 1 | inverted CD4/CD8 ratio, leukopenia, neutropenia, monocytopenia | viral infection | Y | ||||
P0449 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | I359 | MDS-RCC | F | 15.9 | normal | Y | SETBP1 | ||||||
P0450 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2025 | 40664679 | I390 | MDS-EB | F | 16.4 | monosomy 7 | upper respiratory airway infection | ASXL1, CSF3R, RUNX1, SETBP1 | ||||||
P0451 | c.1215G>T | p.Lys405Asn | missense_variant | Novel | VUS | familial | 2023 | 38067298 | 40664679 | I391 | MDS-RCC | M | 8.2 | normal | recurrent respiratory tract infections (not specified) | bronchial asthma (wheezing, respiratory allergies) | |||||
P0452 | c.380_383dup | p.Ser129ProfsX57 | frameshift_variant | Novel | LPAT | unknown | 2023 | 37837580 | 40664679, 39976744 | I392 / 2 | MDS-RCC | F | 18.3 | normal | inverted CD4/CD8 ratio, leukopenia, neutropenia, monocytopenia | recurrent oral aphthae | ASXL1 | ||||
P0453 | c.1341C>A | p.Ser447Arg | missense_variant | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | NL097 | MDS-RCC/RAEB-t | M | 12.9 | monosomy 7 | ASXL1, BCOR, EZH2 | ||||||
P0454 | c.1168A>G | p.Lys390Glu | missense_variant | Novel | VUS | unknown | 2016 | 26702063 | 34469508, 40664679 | NL113 | MDS-RAEB | F | 12.8 | der(1;7), trisomy 8 | HOXA9, RAD21, PTEN, STAG2 | ||||||
P0455 | c.1069A>G | p.Thr357Ala | missense_variant | Novel | LPAT | familial | 2016 | 26702063 | 34469508, 40664679 | NL116 | MDS-RAEB | F | 15.3 | der(1;7), trisomy 11 | STAG2 | ||||||
P0456 | c.1069A>G | p.Thr357Ala | missense_variant | Novel | LPAT | familial | 2016 | 26702063 | 40664679 | NL134 | MDS-RCC | F | 15.3 | trisomy 8 | RUNX1 | ||||||
P0457 | c.1069A>G | p.Thr357Ala | missense_variant | Novel | LPAT | familial | 2025 | 40664679 | NL_6592 | MDS-RCC | F | >18 | trisomy 8 | ||||||||
P0458 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | de novo | 2025 | 40664679 | NO024 (old SC177) | MDS-RCC | F | 16.7 | normal | inverted CD4/CD8 ratio, low B-/NK cells, CD4/8 ratio 0.8 | HPV | STAG2 | |||||
P0459 | c.1098_1100del | p.Asp367del | inframe_deletion | Novel | LPAT | unknown | 2025 | 40664679 | NO030 (old SC220) | MDS-RCC | F | 14.7 | monosomy 7, add(tris8) | ||||||||
P0460 | c.1021_1024dup | p.Ala342GlyfsX43 | frameshift_variant | Novel | PAT | de novo | 2022 | 34893945 | 40664679 | NO039 / Patient 13 | MDS-RCC | M | 11.9 | monosomy 7 | HPV | Y | asthma | ASXL1, SETBP1 | |||
P0461 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | de novo | 2016 | 26702063 | 40664679 | PL027 | MDS-RCC | M | 14.9 | monosomy 7 | SETBP1 | ||||||
P0462 | c.58C>T | p.Gln20X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | PL073 | MDS-RCC | F | 15.7 | monosomy 7 | NRAS, SETBP1 | |||||||
P0463 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | de novo | 2016 | 26702063 | 40664679 | SE053 (old SC152) | MDS-RAEB | F | 12.2 | monosomy 7 | interstitial process in the lung (suspescted PAP) | ASXL1, CBL, SETBP1 | |||||
P0464 | c.348G>A | p.Trp116X | stop_gained | Novel | LPAT | unknown | 2025 | 40664679 | SE075 (old SC216) | MDS-EB | M | 7.2 | monosomy 7 | recurrent respiratory tract infections (not specified) | bronchial asthma | ETV6, EZH2, RUNX1, RUNX1 | |||||
P0465 | c.982C>T | p.Gln328X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | No ID_2 | MDS-RCC | F | 8.9 | monosomy 7 | SETBP1, SETP1, WT1 | |||||||
P0466 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2025 | 40664679 | No ID_3 | MDS-RCC | M | 15.4 | normal | hypogammaglobulinemia, CVID, B-/NK-lymphopenia, hypogammaglobulinemia | HPV | ||||||
P0468 | c.1154C>T | p.Pro385Gln | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | father of No ID_6 | B/NK-lymphopenia | M | 46.5 | NA | B-/-NK-lymphopenia, decreased transitional B-lymphocytes | |||||||
P0469 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | No ID_7 | MDS-EB | F | 11.0 | monosomy 7 | Y | |||||||
P0470 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | No ID_8 | MDS-EB | F | 15.1 | monosomy 7 | ||||||||
P0471 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | No ID_9 | MDS-RCC | F | 15.0 | monosomy 7 | ||||||||
P0472 | c.1078T>C | p.Trp360Arg | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | No ID_10 | MDS-EB | M | 17.5 | trisomy 8 | HPV | Y | ||||||
P0473 | c.1017+526_1017+540delinsA | p.= | regulatory_region_variant | Novel | VUS | de novo | 2025 | 40664679 | No ID_13 | AML | F | 16.2 | normal | inverted CD4/CD8 ratio, low CD4 cells | |||||||
P0474 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | de novo | 2025 | 40664679 | No ID_14 | Immunodeficiency | F | 11.2 | normal | hypogammaglobulinemia, low IgG (hypogammaglobulinemia),low B-/NK-cells | upper respiratory tract infection | ||||||
P0475 | c.202del | p.Ala68ArgfsX12 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | No ID_15 | MDS-EB | M | 13.2 | monosomy 7 | upper respiratory tract infection | Y | JAK3, PTPN11, NRAS | |||||
P0476 | c.980G>C | p.Gly327Ala | missense_variant | Novel | VUS | unknown | 2025 | 40664679 | No ID_21 | MDR-AML | M | 13.7 | trisomy 8 | fever, night sweats | Y | ||||||
P0477 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2025 | 40664679 | No ID_25 | AUL/MDS | F | 10.2 | monosomy 7, add(+8) | GATA2 | |||||||
P0478 | c.1084del | p.Arg362GlufsX25 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | No ID_28 | MDS-EB | F | 11.7 | monosomy 7 (del7q?) | HPV | Y | BRAF, NRAS, SETBP1 | |||||
P0479 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | de novo | 2025 | 40664679 | No ID_32 | MDS-EB | F | 7.3 | monosomy 7 +add (tris11, structural aberration 3p) | ||||||||
P0480 | c.1018-2A>C | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2025 | 40664679 | No ID_34 | MDS-RCC | F | 8.1 | monosomy 7/tris8 | B-lymphopenia | plantar HPV | bronchiectasis, tracheomalacia, reduced lung function | |||||
P0481 | c.1187G>T | p.Arg396Leu | missense_variant | Novel | PAT | familial | 2023 | 36815365 | 40664679 | 816 / P7 | MDS-MLD | M | 30.0 | NA | inverted CD4/CD8 ratio, B-/NK-lymphopenia, monocytopenia, low Tregs | viral pneumonia, mild recurrent respiratory tract infections | ARDS (due to pneumonia) | STAG2, ELANE | |||
P0482 | c.1187G>T | p.Arg396Leu | missense_variant | Novel | PAT | familial | 2023 | 36815365 | 40664679 | NA / P20 | MDS-RCC | M | 14.0 | NA | low B cell count, monocytopenia | ARDS | |||||
P0483 | c.1187G>T | p.Arg396Leu | missense_variant | Novel | PAT | familial | 2023 | 36815365 | 40664679 | 3419 / P8 | SLE-like syndrome, immunodeficiency | F | 15.0 | NA | low B, NK cell counts, monocytopenia, SLE-like syndrome | genital herpes, CMV infection | focal pulmonary alveolar proteinosis (PAP), interstitial fibrosis and infiltrates | ASXL1 | |||
P0484 | c.1036_1037insTCTGGCC | p.Gly346SerfsX40 | frameshift_variant | Novel | LPAT | unknown | 2023 | 36815365 | 40664679 | 6795 / P9 | secondary HLH | M | 24.0 | NA | low B, NK cells | Y | CSMD1 | ||||
P0485 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2023 | 36815365 | 40664679 | 1010083 / P4 | deduced MDS | F | 37.0 | NA | low B, NK cell count, monocytopenia | refractory genital HPV | chronic obstructive pulmonary disease | STAG2, ATRX, TCF3, MSH2, SMC1A | |||
P0486 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2023 | 36815365 | 40664679 | 1700220 / P1 | MDS-RCC | M | 8.0 | monosomy 7 | persistant molluscum | ||||||
P0487 | c.1132A>T | p.Lys378X | stop_gained | Novel | PAT | unknown | 2023 | 36815365 | 40664679 | 55101 / P3 | Immunodeficiency with BM dysplasia (no MDS) | F | 13.0 | monosomy 7 + add (trisomy 8, del17p) | |||||||
P0488 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2023 | 36815365 | 40664679 | 180138 / P2 | MDS-MLD | M | 18.0 | normal | inverted CD4/CD8 ratio, low B cell count, monocytopenia | HPV | Y | Y | |||
P0489 | c.818del | p.Gly273AspfsX53 | frameshift_variant | Novel | PAT | unknown | 2023 | 36815365 | 40664679 | 134938 / P5 | MDS-MLD | F | 51.0 | normal | monocytopenia | KRAS, PIGA, JAK2 | |||||
P0490 | c.782G>C | p.Ser261Thr | missense_variant | Novel | VUS | unknown | 2023 | 36815365 | 40664679 | 131103 / P6 | AML | F | 75.0 | trisomy 8 | monocytopenia | CSMD1, RUNX1, IDH2, CBLB | |||||
P0491 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2016 | 26702063 | 40664679 | 16601834 / P11 | MDS-MLD | M | 45.0 | monosomy 7 | lack of monocytes and NK cells, B cell count low, erythema nodosum | influenca A and B, recurrent lower respiratory infections | SETBP1 | ||||
P0492 | c.913C>G | p.Leu305Val | missense_variant | Novel | VUS | unknown | 2023 | 36815365 | 40664679 | 15414113 / P10 | MDS-MLD | F | 59.0 | normal | B, NK cell counts low, Neutrophilic dermatosis | Influenza A | Y | Chronic respiratory insufficiency | SETBP1, EP300, SRSF2 | ||
P0493 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2016 | 26702063 | 40664679 | 15252685 / P12 | MDS-MLD | M | 32.0 | trisomy 8 | NK-lymphopenia | HPV, CMV, EBV | Y | STAG2 | |||
P0494 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2022 | 35273927 | 40664679 | No ID_36 / 1 | MDS <5% | F | 14.9 | normal | inverted CD4/CD8 ratio | recurrent bronchitis | |||||
P0495 | c.1033_1060del | p.Ala345ArgfsX33 | frameshift_variant | Novel | LPAT | unknown | 2022 | 35273927 | 40664679 | No ID_37 / 2 | MDS <5% | F | 10.1 | normal | inverted CD4/CD8 ratio, B/NK-lymphopenia | recurrent otitis and bronchitis, fatal varicella encephalitis | Y | ||||
P0496 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2022 | 35273927 | 40664679 | No ID_38 / 3 | MDS <5% | M | 17.6 | trisomy 8 | B/T/NK-lymphopenia | ||||||
P0497 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2022 | 35273927 | 40664679 | No ID_39 / 4 | MDS <5% | F | 2.8 | monosomy 7 | Y | ||||||
P0498 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2022 | 35273927 | 40664679 | No ID_40 / 5 | MDS <5% | M | 10.0 | monosomy 7 | inverted CD4/CD8 ratio, B/T/NK-lymphopenia | recurrent tonsillitis and bronchitis | Y | ||||
P0499 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2022 | 35273927 | 40664679 | No ID_41 / 6 | MDS <5% | M | 8.7 | monosomy 7 | B-lymphopenia | ||||||
P0500 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2022 | 35273927 | 40664679 | No ID_42 / 7 | MDS <5% | F | 10.7 | normal | recurrent bronchitis, CMV-, EBV-viremia | ||||||
P0501 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2022 | 35273927 | 40664679 | No ID_43 / 8 | MDS <5% | M | 7.8 | monosomy 7 | recurrent bronchitis | ||||||
P0502 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2022 | 35273927 | 40664679 | No ID_44 / 9 | MDS <5% | M | 10.0 | normal | inverted CD4/CD8 ratio, B/T/NK-lymphopenia | recurrent bronchitis, HPV | |||||
P0503 | c.1144-2A>C | p.? | splice_acceptor_variant | Novel | LPAT | unknown | 2022 | 35273927 | 40664679 | No ID_45 / 10 | MDS <5% | M | 12.5 | NA | inverted CD4/CD8 ratio, B/NK-lymphopenia | recurrent bronchitis and otitis | Y | ||||
P0504 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2020 | 32555368 | 40664679 | A2604 / P9 (UKA2604) | MDS-MLD | F | 24.0 | normal | no DC, monocytopenia, B-/NK-cell lymphopenia, Crohn’s colitis | HPV | Y | ||||
P0505 | c.1046G>A | p.Cys349Tyr | missense_variant | Novel | PAT | familial | 2025 | 40664679 | No ID_1 | MDS-RCC | F | 21.4 | trisomy 8 | vasculitis | oral apthae, gingivitis | Y | |||||
P0506 | c.207_208del | p.Val70LeufsX114 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | No ID_19 | Emberger-syndrome | M | 40.3 | normal | Y | ASXL1, GATA2, GATA2, STAG2 | ||||||
P0507 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2025 | 40664679 | No ID_24 | MDS | M | 27.0 | monosomy 7 (del7q?) | ||||||||
P0508 | c.494A>G | p.His165Arg | missense_variant | Novel | VUS | unknown | 2025 | 40664679 | No ID_16 | MDS-EB | F | 32.0 | normal | ||||||||
P0509 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | No ID_18 | MDS-MLD | F | 18.2 | monosomy 7 + add? (trisomy 8) | ||||||||
P0510 | c.982C>T | p.Gln328X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | CCI-1 | MDS-MLD | M | 23.9 | monosomy 7 | inverted CD4/CD8 ratio, low CD4, later monocytopenia, low B-/NK-cells, Sarcoidosis-like presentation, pulmonary vasculitis | HPV, HSV infection, oral aphthae | Y | |||||
P0511 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | CCI-2 | MDS-MLD | M | 24.7 | normal | low B-/NK-cells (lack of transitional B cells), no DC cells, sweet syndrome | HPV, CMV infection,pharyngitis | Y | |||||
P0512 | c.1116_1117del | p.Cys373TrpfsX10 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | CCI-3 | MDS >5% blasts | F | 35.2 | del(5q) | hypersensivity associated vasculitis of the lower limbs, severe local reaction after hepatitis A vaccination, recurrent arthritis | HPV | STAG2 | |||||
P0513 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | CCI-4 | neutropenia, hypocellular BM |
F | 36.0 | trisomy 8 | B-/NK-lymphopenia | DNMT3A, TP53 | ||||||
P0514 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | CCI-5 | MDS-MLD | M | 42.7 | monosomy 7 | B-lymphopenia | H1N1 | STAG2 | |||||
P0515 | c.1180C>T | p.Gln394X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | CCI-6 | MDS-MLD | F | 46.2 | trisomy 8 | T-/B-/NK-lymphopenia | HPV, bronchitis (not specified), chronic sinusitis | Y | Y | Y | STAG2 | ||
P0516 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2025 | 40664679 | CCI-7 | MDS-MLD | F | 38.0 | normal | erythema nodosum | Y | Y | COP, pulmonary hypertension, severe respiratory insufficiency, severe diffusion disturbance, restrictive ventilatory, primary fibrotic alterations of lung parenchyma, dry coughing attacks | ASXL1 | |||
P0517 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | CCI-CZ1 | MDS-MLD | F | 18.8 | del(5q) | B-lymphopenia | recurrent herpes infections, upper respiratory tract infection (not specified) | bronchial asthma | |||||
P0518 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2025 | 40664679 | CCI-CZ2 | MDS-MLD | M | 20.0 | monosomy 7 | chronic active EBV | interstitial lung disease (not specified) | ASXL1, CTCF, EZH2 | |||||
P0519 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2025 | 40664679 | No ID_23 brother of CCI-CZ2 | MDS-RCC | M | 18.0 | normal | ||||||||
P0520 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2025 | 40664679 | father of CZ054 | asymptomatic | M | NA | NA | ||||||||
P0521 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2025 | 40664679 | father of CZ061 | asymptomatic | M | NA | NA | ||||||||
P0522 | c.1017+582G>T | p.= | regulatory_region_variant | Novel | VUS | familial | 2025 | 40664679 | nephew of D 983 | asymptomatic | M | NA | NA | ||||||||
P0523 | c.1017+582G>T | p.= | regulatory_region_variant | Novel | VUS | familial | 2025 | 40664679 | brother of D 983 | asymptomatic | M | NA | NA | ||||||||
P0524 | c.1017+582G>T | p.= | regulatory_region_variant | Novel | VUS | familial | 2025 | 40664679 | father of D 983 | asymptomatic | M | NA | NA | ||||||||
P0525 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | father of D 1372 | asymptomatic | M | NA | NA | ||||||||
P0526 | c.1215G>T | p.Lys405Asn | missense_variant | Novel | VUS | unknown | 2025 | 40664679 | mother of I 391 | asymptomatic | F | NA | NA | ||||||||
P0527 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2025 | 40664679 | mother of I 390 | symptomatic | F | NA | NA | ||||||||
P0528 | c.1046G>A | p.Cys349Tyr | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | father of No ID_1 | asymptomatic | M | NA | NA | ||||||||
P0529 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2025 | 40664679 | father of CCI-CZ2 | symptomatic | M | NA | NA | B-lymphopenia (reduced naive B cells), ankylosing spondylitis | |||||||
P0530 | c.1051A>G | p.Asn351Asp | missense_variant | Novel | VUS | unknown | 2024 | 38290790 | 32-year-old Japanese woman | MDS-EB1 | F | 32 | der(1;7)(q10;p10), trisomy 6, trisomy 8, trisomy 1, monosomy 17, +mar | fever, hypergammaglobulinemia, lymphopenia, monocytopenia, low B, NK cell count, granulomatous panuveitis and bilateral erythematous plaques on the legs confirmed to be leukocytoclastic vasculitis, myocarditis | EBV | PAP, dyspnea | |||||
P0531 | c.140_177delinsGCCTCCTCAATCACCTCGACTCGCAGGGCAACCCCTAG | p.Val47_Gly48delinsGlyLeuLeuAsnHisLeuAspSerGlyGlyAsnPro delinsGLL;Y59X |
inframe_insertion | Novel | VUS | familial | 2018 | 29724903 | 36727400 | P1* / 28 | MDS | NA | 22 | trisomy 8 | genital HPV | STAG2, ASXL1, CEBPA, ETV6 | |||||
P0532 | c.229+13_229+14insGCC | p.? | splice_region_variant | Novel | VUS | familial | 2018 | 29724903 | P2 (brother) | MDS | M | 21 | monosomy 7, trisomy 1, der(1;7)(q10;p10), del(20)(q12) | cutaneous and genital HPV, labial HSV | Y | ||||||
P0533 | c.229+13_229+14insGCC | p.? | splice_region_variant | Novel | VUS | familial | 2018 | 29724903 | P2 (sister) | MDS | F | 18 | monosomy 7 with complex | ||||||||
P0534 | c.317_318del | p.Ser106CysfsX78 | frameshift_variant | Novel | LPAT | unknown | 2018 | 29724903 | 36727400 | P3* / 54 | immunodeficiency, hematological malignancy | F | 29 | normal | psoriatic arthritis | Y | PAP | ASXL1, STAG2, STAG2 | |||
P0535 | c.353del | p.Val118GlyfsX100 | frameshift_variant | Novel | LPAT | unknown | 2018 | 29724903 | P4* | MDS | NA | 11 | monosomy 7 | ||||||||
P0536 | c.423C>A | p.Tyr141X | stop_gained | Novel | PAT | unknown | 2018 | 29724903 | P5* | MDS | NA | 13 | monosomy 7 | genital HPV, Herpes varicella Zoster infection | |||||||
P0537 | c.437del | p.Gly146ValfsX72 | frameshift_variant | Novel | PAT | unknown | 2018 | 29724903 | P6 (father) | MDS | M | 26 | NA | Y | |||||||
P0538 | c.538G>T | p.Glu180X | stop_gained | Novel | LPAT | unknown | 2018 | 29724903 | P7* | MDS | NA | 20 | normal | cutaneous HPV | |||||||
P0539 | c.610C>T | p.Arg204X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903, 36727400, 39497062 | P8* / 60 | immunodeficiency, MDS, AML-M4, HLH | F | 19 | trisomy 1q, der9 t(1;9)(q12;q1 2), ring(9)(q12 ;q ?3 4), 11q23(2) | HLH | EBV infection, cutaneous HPV, Zoster, CMV (hemophagocytic syndrome) | Y | ||||
P0540 | c.670G>T | p.Glu224X | stop_gained | Novel | PAT | familial | 2013 | 23223431 | 29724903 | P9* | MDS | NA | 10 | normal | cutaneous and genital HPV | ||||||
P0541 | c.890A>G | p.Asn297Ser | missense_variant | Novel | VUS | unknown | 2018 | 29724903 | P10* | MDS, AML-M0 | NA | 22 | inversion 3 | ||||||||
P0542 | c.915_916del | p.Trp306AlafsX77 | frameshift_variant | Novel | PAT | familial | 2018 | 29724903 | 36727400 | P11* / 32 | MDS | M | 4 | monosomy 7, +mar1, +mar2 | Y | EZH2 | |||||
P0543 | c.937C>T | p.His313Tyr | missense_variant | 6.759E-06 | VUS | familial | 2018 | 29724903 | P12* | MDS, undifferentiated leukemia | NA | 21 | deletion 5, deletion 7, add 10, deletion 12, monosomy 18, monosomy 21 | viral meningitis, skin HSV | |||||||
P0544 | c.941_951del | p.Tyr314CysfsX66 | frameshift_variant | Novel | PAT | familial | 2018 | 29724903 | P13* | MDS | NA | 18 | monosomy 7 | flu infection | |||||||
P0545 | c.944T>C | p.Leu315Phe | missense_variant | Novel | VUS | unknown | 2018 | 29724903 | 26710799 | P14*/ 3 (5964) | symptomatic | NA | 1 | NA | |||||||
P0546 | c.1020_1029dup | p.Arg344GlyfsX43 | frameshift_variant | Novel | PAT | unknown | 2018 | 29724903 | 36727400 | P18* / 49 | MDS, congenital malformations | F | 23 | normal | Y | PAP | BCOR, STAG2 | ||||
P0547 | c.1023dup | p.Ala342ArgfsX42 | frameshift_variant | Novel | LPAT | unknown | 2018 | 29724903 | 36727400 | P20* / 58 | immunodeficiency, hematological malignancy | F | 18 | normal | genital and cutaneous HPV | Y | Y | STAG2 | |||
P0548 | c.1045T>C | p.Cys349Arg | missense_variant | Novel | LPAT | de novo | 2018 | 29724903 | P21* | MDS | NA | 20 | der(3)t, dic(1;3)(p11; p25) | erythema nodosum | cutaneous HPV, viral meningitis, oral HSV | Y | |||||
P0549 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | de novo | 2011 | 21892158 | 28747912 | Emb-03 I-1 / Patient 1 | MDS, AML | F | 12 | NA | Y | ||||||
P0550 | c.1019_1022del | p.Ala341ProfsX45 | frameshift_variant | Novel | LPAT | unknown | 2011 | 21892158 | Emb-04 I-1 | MDS | M | 11 | NA | Y | Y | ||||||
P0551 | c.1018-3_1031del | p.Ala341ArgfsX38 | frameshift_variant | Novel | LPAT | unknown | 2011 | 21892158 | Emb-05 I-1 | symptomatic | F | NA | NA | low CD4/CD8 ratio | cutaneous HPV | Y | |||||
P0552 | c.1117T>C | p.Cys373Arg | missense_variant | Novel | LPAT | de novo | 2011 | 21892158 | Emb-06 I-1 | MDS | M | 16 | NA | persistent HPV on fingers | |||||||
P0553 | c.1082G>C | p.Arg361Leu | missense_variant | Novel | LPAT | familial | 2011 | 21892158 | 37406166 | Emb-07 I-1 / Family_52_2 | MDS | M | 10 | NA | low CD4/CD8 ratio | cutaneous HPV | Y | Y | EP300, STAG2 | ||
P0554 | c.579_580insA | p.Ala194SerfsX8 | frameshift_variant | Novel | PAT | de novo | 2011 | 21892158 | Emb-08 I-1 | AML | M | 12 | NA | Y | |||||||
P0555 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | de novo | 2016 | 27013649 | 28642594 | UPN2 | immunodeficiency, RCC | F | 21 | trisomy 8 | low B cell count | skin HPV, aphtous stomatitis | bronchial asthma | ||||
P0556 | c.391_395del | p.? | frameshift_variant | Novel | PAT | de novo | 2016 | 27013649 | UPN3 RCC | MDS-RCC | NA | 12 | monosomy 7 | Y | Y | ||||||
P0557 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | de novo | 2016 | 27013649 | UPN9 RAEB/AML | MDS-RAEB, AML | NA | 17 | monosomy 7 | Y | |||||||
P0558 | c.1066_1095del | p.Thr356_Asp365del | inframe_deletion | Novel | LPAT | de novo | 2016 | 27013649 | UPN10 RCC/RAEB-t | MDS-RCC/RAEBt | NA | 16 | monosomy 7 | ||||||||
P0559 | c.1035_1038dup | p.Thr347ArgfsX38 | frameshift_variant | Novel | PAT | de novo | 2016 | 27013649 | UPN11 RAEB | MDS-RAEB | NA | 4.4 | monosomy 7 | aphtous stomatitis | bronchial asthma | ||||||
P0560 | c.1128C>G | p.Tyr376X | stop_gained | Novel | PAT | de novo | 2016 | 27013649 | UPN12 ID/RCC | MDS-RCC | NA | 13 | normal | Y | Y | ||||||
P0561 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2014 | 24345756 | 10.I.1 | symptomatic | NA | 22 | NA | HPV infection | respiratory symptoms | ||||||
P0562 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2014 | 24345756 | 28642594 | 5.I.1 | MDS, DCML | NA | 40 | NA | autoimmunity | HPV | Y | ||||
P0563 | c.257_258del | p.Cys85fsX? | frameshift_variant | Novel | PAT | unknown | 2014 | 24345756 | 11.I.1 | symptomatic | NA | 8 | monosomy 7 | autoimmunity | |||||||
P0564 | c.1018-1G>A | p.? (r.340_381del) | splice_acceptor_variant | Novel | PAT | unknown | 2014 | 24345756 | 12.I.1 | MDS | NA | 22 | NA | HPV infection | Y | respiratory symptoms | |||||
P0565 | c.735dup | p.Ile246HisfsX36 | frameshift_variant | Novel | PAT | unknown | 2014 | 24345756 | 13.I.1 | symptomatic | NA | 19 | NA | HPV infection | |||||||
P0566 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2014 | 24345756 | 15.I.1 | MDS | F | 4 | NA | autoimmunity | HPV | ||||||
P0567 | c.1081-3_1031del | p.Ala341fsX? | frameshift_variant | Novel | LPAT | unknown | 2014 | 24345756 | 16.I.1 | symptomatic | NA | 9 | NA | HPV infection | Y | ||||||
P0568 | c.989_992dup | p.Leu332ThrfsX53 | frameshift_variant | Novel | LPAT | unknown | 2012 | 22147895 | 24227816 | Patient 7 | MDS, AML | M | 14 | monosomy 7, trisomy 8 | |||||||
P0569 | c.1017+2T>G | p.? | splice_donor_variant | Novel | PAT | unknown | 2012 | 22147895 | Patient 10 | MDS, immunodeficiency | M | 19 | NA | HPV | |||||||
P0570 | c.1060A>C | p.Thr354Pro | missense_variant | Novel | PAT | familial | 2018 | 29724903 | P22* | MDS | NA | 15 | normal | granulomatous dermatitis lupus-like | cutaneous HPV, buccal HSV | ||||||
P0571 | c.1061C>G | p.Thr354Met | missense_variant | Novel | PAT | familial | 2018 | 29724903 | 39497062 | P23* | MDS, HLH | F | 21 | hyerdiploid | HLH, sarcoidosis | genital HPV | Y | ||||
P0572 | c.1070C>T | p.Thr357Ile | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P24* | MDS | F | 25 | normal | Takayasu’s disease | genital HPV | ||||||
P0573 | c.1076T>C | p.Leu359Ser | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | 36727400 | P25 (brother) / 46 | MDS, AML-M2 | M | 61 | normal | ASXL1, BCOR, BCORL1, JAK2, NF1, RUNX31, SF3B1, STAG2 | ||||||
P0574 | c.1077_1082dup | p.Trp360_Arg361dup | inframe_insertion | Novel | LPAT | familial | 2018 | 29724903 | P26* | MDS | F | 37 | trisomy 8 | cutaneous HPV | |||||||
P0575 | c.1081C>G | p.Arg361Gly | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P27* | symptomatic | NA | 23 | NA | Y | |||||||
P0576 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | 36727400 | P28* / 40 | cytopenias, MDS | F | 5 | normal | psoriasis | cutaneous HPV | PAP | DNMT3A | |||
P0577 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P29* | MDS, AML | M | 25 | monosomy 7 | cutaneous HPV | Y | ||||||
P0578 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2018 | 29724903 | P30* | MDS | F | 8 | del(20)(q11) | cutaneous HPV, oral HSV | |||||||
P0579 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2018 | 29724903 | P31* | MDS | M | 21 | normal | cutaneous HPV | |||||||
P0580 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2018 | 29724903 | 36727400 | P32* / 76 | immunodeficiency, MDS | M | 10 | trisomy 8 | dermo-hypodermitis, sarcoidosis-like disease, psoriasis | Y | Y | pulmonary segmental edema | STAG2 | ||
P0581 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2018 | 29724903 | 36727400 | P33* / 26 | MDS | M | 11 | normal | dermo-hypodermitis | aphthous stomatitis | Y | ||||
P0582 | c.1103_1104del | p.Pro368ArgfsX15 | frameshift_variant | Novel | PAT | unknown | 2018 | 29724903 | P35* | symptomatic | NA | 43 | NA | JC virus infection | |||||||
P0583 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | familial | 2018 | 29724903 | P37 (son) | CMML | M | 42 | trisomy 8 | ||||||||
P0584 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P38* | AML-M2 | NA | 20 | ?der(7)?r(7)(?p ?q) [22] del7q | EBV-related pneumonia | |||||||
P0585 | c.1118G>A | p.Cys373Tyr | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | 36727400 | P39* / 72 | immunodeficiency, MDS | F | 17 | trisomy 1, monosomy 15 | panniculitis, erythema nodosum | cutaneous HPV | Y | interstitial lung disease | STAG2 | ||
P0586 | c.1142del | p.Asn381MetfsX6 | frameshift_variant | Novel | PAT | unknown | 2018 | 29724903 | 36727400, 39497062 | P40* / 33 | MDS, HLH | NA | 14 | normal | HLH | cutaneous HPV, influenza A (hemophagocytic syndrome) | EZH2 | ||||
P0587 | c.1143+5G>C | p.? | splice_region_variant | Novel | LPAT | unknown | 2018 | 29724903 | P41* | MDS | NA | 11 | trisomy 8 | genital HPV | |||||||
P0588 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P44* | MDS | NA | 9 | monosomy 7 | atypical Kawasaki syndrome with arthritis, arthritis | |||||||
P0589 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2018 | 29724903 | P45 (mother) | MDS | F | 25 | NA | ||||||||
P0590 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2018 | 29724903 | P47* | JMML | NA | 0 | normal | bronchiolitis | |||||||
P0591 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | unknown | 2018 | 29724903 | P49* | MDS | NA | 25 | trisomy 8 | Y | |||||||
P0592 | c.1-?_1443+?del | p.? | transcript_ablation | Novel | PAT | unknown | 2018 | 29724903 | P50* | MDS | M | 18 | normal | hepatitis A | |||||||
P0593 | c.1-?_1443+?del | p.? | transcript_ablation | Novel | PAT | unknown | 2018 | 29724903 | P51* | MDS | NA | 13 | monosomy 7, trisomy 8 | Y | |||||||
P0594 | del3q21 | del3q21 | transcript_ablation | Novel | PAT | unknown | 2018 | 29724903 | P52* | MDS, AML | NA | 2 | monosomy 7 | oral HSV, cutaneous HPV | |||||||
P0595 | c.1-?_1443+?del | p.? | transcript_ablation | Novel | PAT | unknown | 2018 | 29724903 | P53* | AML | NA | 18 | monosomy 7 | ||||||||
P0596 | c.1017+699insT | p.= | regulatory_region_variant | Novel | VUS | unknown | 2016 | 26702063 | D506 | MDS-RCC | M | 13.5 | NA | ||||||||
P0597 | c.17_18del | p.Glu6AlafsX178 | frameshift_variant | Novel | PAT | unknown | 2019 | 31340620 | Patient ID#4 | MDS-EB | M | 5 | monosomy 7 | ||||||||
P0598 | c.303del | p.Ala103GlnfsX16 | frameshift_variant | Novel | PAT | unknown | 2019 | 31340620 | Patient ID#11 | MDS-EB | F | 16 | der(1;7)(q10;p10) | ||||||||
P0599 | c.1019del | p.Ser340TrpfsX47 | frameshift_variant | Novel | LPAT | unknown | 2019 | 31340620 | Patient ID#6 | MDS-RCC | M | 8 | monosomy 7 | ||||||||
P0600 | NA | p.Arg344LysfsX40 | frameshift_variant | Novel | LPAT | unknown | 2019 | 31340620 | Patient ID#5 | MDS-EB | M | 7 | normal | ||||||||
P0601 | c.1023_1038dup | p.Thr347ArgfsX42 | frameshift_variant | Novel | LPAT | unknown | 2019 | 31340620 | 000 | MDS-RCC | F | 3 | monosomy 7 | ||||||||
P0602 | c.1055G>T | p.Cys352Phe | missense_variant | Novel | LPAT | unknown | 2019 | 23563236 | Patient ID#7 | AML | M | 10 | der(1;7)(q10;p10), trisomy1 | ||||||||
P0603 | c.1124del | p.Leu375ProfsX12 | frameshift_variant | Novel | PAT | unknown | 2019 | 31340620 | Patient ID#9 | MDS-EB | F | 14 | monosomy 7 | ||||||||
P0604 | c.1160C>A | p.Thr387Asn | missense_variant | 6.762E-06 | VUS | unknown | 2019 | 23563236 | Patient ID#1 | MDS-RCC | F | 1 | trisomy 8 | SETBP1 , ASXL1 , RUNX1, | |||||||
P0605 | c.1200_1216dup | p.Lys406SerfsX77 | frameshift_variant | Novel | LPAT | unknown | 2019 | 31340620 | Patient ID#8 | MDS-EB | M | 12 | monosomy 7 | ||||||||
P0606 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | familial | 2013 | 23563236 | index patient (brother) | AML | M | <14 | NA | ||||||||
P0606 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | familial | 2013 | 31340620 | index patient (brother) | AML | M | 14 | NA | ||||||||
P0607 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | unknown | 2013 | 23563236 | index patient (grandmother) | AML | F | <74 | NA | ||||||||
P0607 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | unknown | 2013 | 31340620 | index patient (grandmother) | AML | F | 74 | NA | ||||||||
P0608 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | familial | 2013 | 23563236 | index patient (uncle) | symptomatic | M | NA | NA | Y | |||||||
P0608 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | familial | 2013 | 23563236 | index patient (uncle) | symptomatic | M | NA | NA | Y | |||||||
P0609 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | familial | 2013 | 23563236 | index patient (aunt) | hematological abnormality, immunodeficiency | F | 42 | NA | Y | |||||||
P0609 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | familial | 2013 | 23563236 | index patient (aunt) | hematological abnormality, immunodeficiency | F | 42 | NA | Y | |||||||
P0610 | c.77A>C | p.His26Pro | missense_variant | Novel | VUS | familial | 2013 | 23563236 | index patient (cousin) | AML | NA | <21 | NA | ||||||||
P0610 | c.83del | p.Gly28AlafsX52 | frameshift_variant | Novel | PAT | familial | 2013 | 23563236 | index patient (cousin) | AML | NA | 21 | NA | ||||||||
P0611 | NA | NA | NA | NA | NA | unknown | 2014 | 24227816 | 20040766, 23502222 | 7.I.1 | MDS, LGL | F | 51 | NA | HPV | Y | PAP | ||||
P0612 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2018 | 30030275 | Mother (pedigree II-1) | MDS | F | 40 | monosomy 7, trisomy 8 | ||||||||
P0613 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2018 | 30030275 | Halfbrother 2 (pedigree III-3) | hematological abnormality | M | 18 | NA | ||||||||
P0614 | c.404dup | p.Gly136ArgfsX49 | frameshift_variant | Novel | LPAT | unknown | 2015 | 26716079 | Patient 1 | MDS-RA | F | 35 | normal | low NK, B, CD4 T cells | severe genital HPV | ASXL1 (R693*) | |||||
P0615 | c.982C>T | p.Gln328X | stop_gained | Novel | PAT | unknown | 2021 | 33510405 | HEL16 | MDS-SLD | F | 31 | dic(1;15)(?;?) | systemic sarcoidosis, erythema nodosum | Y | PAP | |||||
P0616 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2021 | 33510405 | HEL13 | MDS-MLD | F | 19 | normal | panniculitis, erythema nodosum | HPV | ||||||
P0617 | NA | NA | NA | NA | NA | familial | 2021 | 33510405 | 182 | MDS-U | F | 22 | nuc ish (7q22)x1,(7q31)x1 [260/400] | leukocytoclastic vasculitis | |||||||
P0618 | c.735dup | p.Ile246HisfsX36 | frameshift_variant | Novel | PAT | unknown | 2018 | 29279357 | 14 | MDS | F | 20 | NA | mild IgG hypogammaglobulinemia, CD19, CD56 lymphopenia | persistent HPV | ||||||
P0619 | c.593del | p.Ala198GlyfsX20 | frameshift_variant | Novel | PAT | unknown | 2019 | 30564229 | Patient 4 | hematological abnormality, immunodeficiency | NA | 12 | NA | monocytopenia, B- and NK- low cells | |||||||
P0620 | c.1172_1175del | p.Glu391GlyfsX85 | frameshift_variant | Novel | PAT | unknown | 2019 | 30564229 | 39497062 | Patient 1 | hematological abnormality, immunodeficiency, HLH | F | 8 | NA | HLH, neutropenia, monocytopenia, B- and NK- low cells | hepatitis, VZV | |||||
P0621 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2013 | 23443460 | 809605 | MDS | NA | NA | NA | ||||||||
P0622 | c.1281dup | p.Phe428LeufsX108 | frameshift_variant | Novel | LPAT | unknown | 2013 | 23443460 | 01-13 | MDS | NA | NA | NA | NRAS, BOD1L, CDH23, SETBP1, SF3A1, SF3B1 | |||||||
P0623 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2021 | 33417088 | H II.1 P9 | MDS, immunodeficiency | F | NA | normal | granulomatous hepatitis, low T, B, NK cells, monocytopenia | EBV | Y | |||||
P0624 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2021 | 33417088 | H II.2 P10 | MDS, immunodeficiency | F | NA | deletions, aneuploidy | low T, B, NK cells, monocytopenia, neutropenia | HPV, HHSV-2 | Y | |||||
P0625 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2021 | 33417088 | L I.1 P14 | symptomatic | F | NA | NA | HPV | Y | Y | |||||
P0626 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2021 | 33417088 | L II.1 P15 | MDS, immunodeficiency | M | NA | NA | low T, B, NK cells, DC, monocytopenia, neutropenia | HPV | Y | Y | ||||
P0627 | c.915_916del | p.Trp306AlafsX77 | frameshift_variant | Novel | PAT | unknown | 2021 | 33417088 | C II.1 P3 | immunodeficiency | M | NA | NA | low T, B, NK cells, monocytopenia, neutropenia | HPV | Y | Y | ||||
P0628 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | de novo | 2021 | 33417088 | I II.1 P11 | MDS, immunodeficiency | M | NA | der(15)(1qter->1q12::15p11->15qter) | monoclonal gammopathy, low T, B, NK cells, DC, monocytopenia, neutropenia, sarcoidosis | Y | ||||||
P0629 | c.1035_1036insTCTGGCC | p.Gly346SerfsX40 | frameshift_variant | Novel | LPAT | unknown | 2021 | 33417088 | 39497062 | K II.1 P13 | MDS, immunodeficiency, HLH? | M | NA | NA | HLH?, low B, NK cells, monocytopenia | Y | Y | ||||
P0630 | c.1099dup | p.Asp367GlyfsX15 | frameshift_variant | Novel | PAT | familial | 2021 | 33417088 | N II.1 P17 | immunodeficiency | F | NA | normal | low T, B, NK cells, DC, monocytopenia, neutropenia | Y | ||||||
P0631 | c.1143+2T>A | p.? | splice_donor_variant | Novel | PAT | de novo | 2021 | 33417088 | O II.1 P18 | MDS | F | NA | trisomy 8 | low B, NK cells, monocytopenia, neutropenia, erythema nodosum | Y | ||||||
P0632 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2021 | 33417088 | A II.1 P1 | immunodeficiency | F | NA | NA | low T cells, monocytopenia | HPV | Y | |||||
P0633 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2021 | 33417088 | J II.2 P12 | immunodeficiency | F | NA | NA | low T, B, NK cells, DC, monocytopenia, neutropenia | Y | Y | |||||
P0634 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2021 | 33417088 | M II.1 P16 | MDS | M | NA | NA | low T, B, NK cells, monocytopenia, psoriasis, sarcoidosis | HSV 1, HPV, molluscum contagiosum | Y | |||||
P0635 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | de novo | 2021 | 33417088 | G II.1 P8 | immunodeficiency | NA | NA | NA | low T, B, NK cells, monocytopenia, absence DC | Y | ||||||
P0636 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2021 | 33417088 | B II.4 P2 | immunodeficiency | F | NA | NA | low T, B, NK cells, monocytopenia | HPV | Y | Y | ||||
P0637 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | familial | 2018 | 30030275 | Halfbrother 1 (pedigree III-2) | symptomatic | M | NA | NA | ||||||||
P0638 | c.1017+2T>G | p.? | splice_donor_variant | Novel | PAT | unknown | 2012 | 22147895 | SAPATH #3 | MDS | M | 19 | monosomy 7 | monocytopenia | HPV | SETBP1 | |||||
P0639 | c.1-200_871+527del | p.Met1del290 | transcript_ablation | Novel | PAT | familial | 2012 | 22147895 | 20040766, 21670465 | 13.II.2 | immunodeficiency | F | NA | NA | HPV, disseminated VZV | ||||||
P0640 | c.1054del | p.Cys352ValfsX35 | frameshift_variant | Novel | PAT | unknown | 2016 | 26767875 | Patient | MDS-RCMD | F | 20 | normal | profound monocytopenia, B/NK-cell lymphocytopenia | HPV, EBV | Y | bilateral pleural effusion | ||||
P0641 | c.892dup | p.Cys298LeufsX86 | frameshift_variant | Novel | PAT | familial | 2015 | 26022708 | Family 1 - Patient 3 | MDS | M | NA | trisomy 8 | ASXL1, ATRX, BRCA2, GPRC5A, IDH2, NRAS, STAG2 | |||||||
P0642 | c.1018-? | del ZF2 & C-terminus | transcript_ablation | Novel | PAT | familial | 2018 | 29680795 | Patient 1 | MDS, MonoMac | M | 24 | normal | HPV | Y | asthma | |||||
P0643 | c.869C>A | p.Ser290X | stop_gained | Novel | LPAT | unknown | 2017 | 29230432 | Patient 1 | immunodeficiency | M | 12 | NA | monocytopenia | ASXL1 | ||||||
P0644 | c.561dup | p.Thr188HisfsX14 | frameshift_variant | Novel | LPAT | unknown | 2020 | 32088370 | Patient ID#13 | MDS-RCC | NA | 16.8 | normal | ||||||||
P0645 | c.817_818del | p.Gly273ThrfsX8 | frameshift_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#1 | MDS-RAEBt/AML | NA | 15.4 | monosomy 7 | ||||||||
P0646 | c.817_818del | p.Gly273ThrfsX8 | frameshift_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#6 | MDS-RAEBt/AML | NA | 13.5 | monosomy 7, trisomy 8 | ||||||||
P0647 | c.818dup | p.Pro274ThrfsX8 | frameshift_variant | Novel | LPAT | unknown | 2020 | 32088370 | Patient ID#15 | AML | NA | 8.9 | cytogenetic abnormalities | ||||||||
P0648 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2020 | 32088370 | Patient ID#4 | ALL | NA | 12.3 | monosomy 7, other cytogenetic abnormalities | ||||||||
P0649 | c.1024_1026del | p.Ala342del | inframe_deletion | Novel | VUS | unknown | 2020 | 32088370 | Patient ID#11 | MDS-RAEBt/AML | NA | 14 | monosomy 7 | ||||||||
P0650 | c.1024_1026del | p.Ala342del | inframe_deletion | Novel | VUS | unknown | 2020 | 32088370 | Patient ID#10 | MDS-RAEBt/AML | NA | 10 | monosomy 7 | ||||||||
P0651 | c.1052A>G | p.Asn351Ser | missense_variant | Novel | VUS | unknown | 2020 | 32088370 | Patient ID#12 | MDS-RCC | NA | 19.8 | monosomy 7 | ||||||||
P0652 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#5 | MDS-RCC | NA | 16 | monosomy 7 | ||||||||
P0653 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#9 | MDS-RCC | NA | 15 | normal | ||||||||
P0654 | c.1113del | p.Asn371LysfsX16 | frameshift_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#3 | AML | NA | 5.4 | monosomy 7, trisomy 8 | ||||||||
P0655 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#14 | MDS-RCC | NA | 15.8 | normal | ||||||||
P0656 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#2 | MDS-RCC | NA | 14 | trisomy 8 | ||||||||
P0657 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#7 | MDS-RCC | NA | 15 | trisomy 8 | ||||||||
P0658 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2020 | 32088370 | Patient ID#8 | MDS-RCC | NA | 18 | monosomy 7, trisomy 8 | ||||||||
P0659 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2020 | 33370941 | Patient 1 | immunodeficiency | F | 9 | NA | monocytopenia, NK Cells low | viral pneumonia, influenza A | Y | |||||
P0660 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2015 | 25239263 | FH-202 | MDS | F | 12 | NA | decreased B cell precursors, psoriasis, erythema multiforme | |||||||
P0661 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2015 | 25239263 | FH-154 | MDS | F | 17 | NA | ||||||||
P0662 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2015 | 25239263 | FH-82 | MDS | F | 16 | NA | ||||||||
P0663 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | familial | 2017 | 28602958 | PATIENT #12 | GATA2 deficiency related bone marrow and immunodeficiency disorder | F | 12.5 | trisomy 8 | mild immune dysfunction | primary EBV | ||||||
P0664 | c.1072_1074del | p.Thr358del | inframe_deletion | Novel | LPAT | unknown | 2017 | 28602958 | PATIENT #13 | GATA2 deficiency related bone marrow and immunodeficiency disorder | M | 11.4 | NA | low B and T cells | HPV | ||||||
P0665 | c.1017+2T>C | p.? (r.Ser340AlafsX49) | splice_donor_variant | Novel | PAT | de novo | 2018 | 29178327 | Japanese man | MDS | M | 33 | NA | inverted CD4/CD8 ratio, lymphopenia, no monocytes, elevated NK cells | severe HPV | Y | |||||
P0666 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2018 | 28440875 | Case 1 | Emberger syndrome, MDS-LB | M | 12 | normal | leukopenia | plantar HPV | Y | |||||
P0667 | c.1020_1029dup | p.Arg344GlyfsX43 | frameshift_variant | Novel | PAT | unknown | 2018 | 28440875 | 27799394 | Case 2 | MDS | F | 28 | normal | panniculitis, hypergammaglobulinemia, monocytopenia, sclerodermiform lesions, erythema nodosum | HPV on hands | Y | shortness of breath, dry cough, interstitial lung disease, sPAP, lymphocytic alveolitis | |||
P0668 | c.1060A>C | p.Thr354Pro | missense_variant | Novel | PAT | de novo | 2018 | 28440875 | Case 3 | MDS | F | 11 | normal | low IgA levels, B cell lymphopenia, lupoid lesions on the cheeks, temples, forehead | Y | ||||||
P0669 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2016 | 27232273 | Patient 1 | B-ALL | F | 11 | complex karyotype with monosomy 7 | fever | severe verruca plantaris (HPV) | Y | |||||
P0670 | c.1143+5G>A | p.? | splice_region_variant | Novel | LPAT | familial | 2018 | 27577878 | 34893945 | 84.1 (monozygotic twins) / Patient 4 | symptomatic | F | 45 | NA | suppurative skin infection after BCG, lupus-like syndrome | HPV, EBV | Y | progressive obliterating bronchiolitis | |||
P0671 | c.1143+5G>A | p.? | splice_region_variant | Novel | LPAT | familial | 2018 | 27577878 | 34893945 | 84.4 (monozygotic twins) / Patient 5 | MDS-MLD | F | 39 | normal | lupus-like syndrome | HPV, VZV, EBV | Y | progressive obliterating bronchiolitis | |||
P0672 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2018 | 27577878 | 34893945 | 86.1 / Patient 7 | MDS-MLD | F | 23 | trisomy 8 | HPV | Y | interstitial lung disease | STAG2 | |||
P0673 | c.1078T>A | p.Trp360Arg | missense_variant | Novel | PAT | unknown | 2018 | 27577878 | 34893945 | 88.1 / Patient 6 | MDS-MLD | M | 26 | trisomy 8 | fever of unknown origin | Y | recurrent pneumothorax | ||||
P0674 | c.1062_1064del | p.Thr358del | inframe_deletion | Novel | LPAT | familial | 2022 | 34893945 | Patient 1 (father of P2 and P3) | hematological abnormality | M | 44 | normal | HPV, disseminated HSV | Y | ||||||
P0675 | c.1062_1064del | p.Thr358del | inframe_deletion | Novel | LPAT | familial | 2022 | 34893945 | Patient 2 (son of P1) | MDS-EB1 | M | 14 | monosomy 7, trisomy 8 | HPV | U2AF1, GATA2 | ||||||
P0676 | c.1062_1064del | p.Thr358del | inframe_deletion | Novel | LPAT | familial | 2022 | 34893945 | Patient 3 (daughter of P1) | asymptomatic | F | 9 | normal | HPV | |||||||
P0677 | c.1017+1G>T | p.? | splice_donor_variant | Novel | LPAT | unknown | 2022 | 34893945 | Patient 8 | symptomatic | F | 53 | normal | Y | |||||||
P0678 | c.163C>T | p.Gln55X | stop_gained | Novel | LPAT | unknown | 2022 | 34893945 | Patient 9 | AML-MRC | F | 23 | der(1;7)(q10;p10), trisomy 1 | erythema nodosum | RUNX1, CSF3R, PHF6, FBXW7 | ||||||
P0679 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2022 | 34893945 | Patient 10 (sibling to P11) | MDS-MLD | F | 31 | trisomy 6, trisomy 8, + 21? + 21 | HPV, cervical dysplasia | Y | BCOR | |||||
P0680 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2022 | 34893945 | Patient 11 (sibling to P10) | MDS-MLD | M | 34 | trisomy 8, der(16)t(1;16)(q21;q24, +der(16)t(1;16), +21 | ASXL1, STAG2 | |||||||
P0681 | c.1098_1100del | p.Asp367del | inframe_deletion | Novel | LPAT | unknown | 2022 | 34893945 | Patient 12 | MDS-RCC | F | 14 | monosomy 7, trisomy 8 | Y | bronchopulmonary dysplasia, asthma | ||||||
P0682 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2022 | 34893945 | Patient 14 | MDS-SLD | F | 31 | normal | Y | STAG2 | ||||||
P0683 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | unknown | 2019 | 31256854 | Patient 44 | hematological abnormality, immunodeficiency | M | NA | NA | ||||||||
P0684 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | unknown | 2019 | 31256854 | Patient 45 | hematological abnormality | F | NA | NA | ||||||||
P0685 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2019 | 31256854 | Patient 46 | immunodeficiency | M | NA | NA | immunodeficiency | Y | ||||||
P0686 | NA | NA | NA | NA | NA | unknown | 2019 | 31256854 | Patient 47 | hematological abnormality, immunodeficiency | M | NA | NA | HPV | ASXL1 | ||||||
P0687 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2019 | 31256854 | Patient 48 | hematological abnormality, immunodeficiency | F | 50 | i(17)(q10) | RSV pneumonitis | |||||||
P0688 | c.1339A>C | p.Ser447Arg | missense_variant | Novel | LPAT | unknown | 2019 | 31256854 | Patient 49 | inherited bone marrow failure, MDS | F | NA | NA | ASXL1 | |||||||
P0689 | c.256del | p.Arg86AlafsX33 | frameshift_variant | Novel | LPAT | unknown | 2019 | 31203817 | 76.1 | MDS-RCMD | F | 29 | NA | neutropenia | mucocutaneous viral infections, HSV encephalitis | ||||||
P0690 | c.1078T>A | p.Trp360Arg | missense_variant | Novel | PAT | unknown | 2017 | 28126493 | Patient 1 | hematological abnormality, immunodeficiency | F | 25 | NA | lymphopenia, monocytopenia | measles, HPV | ||||||
P0691 | c.599del | p.Gly200ValfsX18 | frameshift_variant | Novel | PAT | familial | 2023 | 36727400 | 1 | hematological malignancy (spectrum 1) | M | 16 | normal | HPV | |||||||
P0692 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | de novo | 2023 | 36727400 | 2 | hematological malignancy (spectrum 1) | M | 40 | normal | HPV | Y | ASXL1 | |||||
P0693 | c.257_258del | p.Cys85fsX? | frameshift_variant | Novel | PAT | de novo | 2016 | 27481672 | 36727400 | index patient / 3 | immunodeficiency, MDS-RCC | M | 8 | monosomy 7 | fever, leukopenia, neutropenia, monocytopenia | aphtous stomatitis, chickenpox, HPV, parvovirus B19 | |||||
P0694 | c.1018-1G>A | p.? (r.340_381del) | splice_acceptor_variant | Novel | PAT | de novo | 2023 | 36727400 | 4 | immunodeficiency, hematological malignancy | F | 22 | normal | HPV | BCOR, STAG2, EZH2 | ||||||
P0695 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | de novo | 2023 | 36727400 | 6 | immunodeficiency, hematological malignancy | F | 4 | normal | HPV, chronic EBV | Y | STAG2, STAG2 | |||||
P0696 | c.1045T>G | p.Cys349Gly | missense_variant | Novel | LPAT | de novo | 2023 | 36727400 | 7 | hematological malignancy (spectrum 1) | F | 18 | normal | HPV | Y | Y | STAG2, STAG2 | ||||
P0697 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | de novo | 2023 | 36727400 | 8 | symptomatic | F | 30 | normal | HPV | Y | ||||||
P0698 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 9 | hematological malignancy (spectrum 1) | M | 17 | trisomy 8 | ||||||||
P0699 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 10 | hematological malignancy (spectrum 1) | M | 17 | trisomy 8 | HPV | |||||||
P0700 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 11 | immunodeficiency, hematological malignancy | M | 16 | trisomy 8 | HPV | |||||||
P0701 | c.593del | p.Ala198GlyfsX20 | frameshift_variant | Novel | PAT | de novo | 2023 | 36727400 | 12 | immunodeficiency, hematological malignancy | F | 12 | normal | ASXL1, STAG2, STAG2 | |||||||
P0702 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | de novo | 2023 | 36727400 | 13 | immunodeficiency, hematological malignancy | F | 25 | normal | HPV | STAG2, STAG2, STAG2, STAG2 | ||||||
P0703 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 14 | hematological malignancy (spectrum 1) | F | 0.6 | normal | ||||||||
P0704 | c.1124T>G | p.Leu375Arg | missense_variant | Novel | LPAT | de novo | 2023 | 36727400 | 15 | immunodeficiency, hematological malignancy | M | 21 | normal | HPV | EZH2, RUNX1, STAG2 | ||||||
P0705 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2023 | 36727400 | 16 | cytopenia, hematological malignancy | F | 48 | der7 t(1;7)(q10;q10), monosomy 7 | PAP | ASXL1, RUNX1, STAG2 | ||||||
P0706 | whole gene deletion | whole gene deletion | transcript_ablation | Novel | PAT | familial | 2023 | 36727400 | 17 | immunodeficiency, hematological malignancy | F | 17 | normal | STAG2, ASXL1 | |||||||
P0707 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 18 | congenital malformations | M | 22 | normal | PAP | |||||||
P0708 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2023 | 36727400 | 21 | cytopenia | F | 9 | normal | ||||||||
P0709 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | familial | 2023 | 36727400 | 22 | immunodeficiency, hematological malignancy | F | 24 | monosomy 7 | HPV | SETBP1 | ||||||
P0710 | c.1115C>T | p.Ala372Val | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 23 | asymptomatic | M | NA | normal | ||||||||
P0711 | c.1115C>T | p.Ala372Val | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 24 | immunodeficiency, hematological malignancy | F | 17 | trisomy 1, der(qter--q31:p11-->q21:q11-->qter) | HPV | ASXL1, STAG2, STAG2 | ||||||
P0712 | c.1115C>T | p.Ala372Val | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 25 | cytopenia, hematological malignancy | F | 13 | monosomy 7 | ||||||||
P0713 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | de novo | 2023 | 36727400 | 27 | hematological malignancy | M | 26 | monosomy 7, trisomy 8 | STAG2 | |||||||
P0714 | c.1073C>A | p.Thr358Asn | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 29 | hematological malignancy | M | 25 | monosomy 7 | ||||||||
P0715 | c.1073C>A | p.Thr358Asn | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 30 | asymptomatic | F | NA | normal | ||||||||
P0716 | c.1073C>A | p.Thr358Asn | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 31 | immunodeficiency, hematological malignancy | M | 21 | trismomy 8, der(1;7)(q10;q10) | HPV | STAG2, STAG2, STAG2, ASXL1, KMT2D | ||||||
P0717 | c.1046G>A | p.Cys349Tyr | missense_variant | Novel | PAT | de novo | 2023 | 36727400 | 35 | cytopenia, hematological malignancy | F | 4 | normal | chronic EBV | Y | PAP | BCOR, RAD21, STAG2 | ||||
P0718 | c.1008del | p.Lys336AsnfsX51 | frameshift_variant | Novel | LPAT | unknown | 2023 | 36727400 | 36 | cytopenia, hematological malignancy | M | 14 | monosomy 7 | JAK2, SETBP1, GATA1 | |||||||
P0719 | c.1076T>C | p.Leu359Ser | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 39 | cytopenia, hematological malignancy | M | 46 | del(5)(q15;q34) | ASXL1, ASXL1, RUNX1, STAG2 | |||||||
P0720 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | de novo | 2023 | 36727400 | 41 | hematological malignancy | M | 22 | monosomy 7, +mar(20) | GATA2, NRAS, NRAS, KRAS, KRAS, PTPN11, SETBP1, ASXL1, KIT, IKZF1, IKZF1, TYK2, MYC | |||||||
P0721 | c.1017+534_1017+537delinsCGGATAAGGACATTCCTATCCG | p.= | regulatory_region_variant | Novel | VUS | unknown | 2023 | 36727400 | 42 | immunodeficiency, hematological malignancy | M | 1 | monosomy 7 | HPV | STAG2, STAG2, STAG2, STAG2, STAG2, STAG2, STAG2, STAG2 | ||||||
P0722 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 43 | hematological malignancy (spectrum 2) | M | 40 | normal | STAG2, SETBP1 | |||||||
P0723 | c.976_979dup | p.Gly327GlufsX58 | frameshift_variant | Novel | PAT | familial | 2023 | 36727400 | 44 | immunodeficiency, hematological malignancy | F | 25 | normal | HPV | ASXL1, STAG2 | ||||||
P0724 | c.1076T>C | p.Leu359Ser | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 47 | immunodeficiency | F | 37 | NA | ||||||||
P0725 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2023 | 36727400 | 48 | immunodeficiency, hematological malignancy | M | 28 | normal | Y | STAG2, STAG2, STAG2, STAG2, STAG2, STAG2, STAG2 | ||||||
P0726 | c.1084del | p.Arg362GlufsX25 | frameshift_variant | Novel | PAT | de novo | 2023 | 36727400 | 50 | congenital malformations, hematological malignancy (spectrum 1) | F | 0.9 | normal | PAP | STAG2 | ||||||
P0727 | c.1045dup | p.Cys349LeufsX35 | frameshift_variant | Novel | PAT | de novo | 2023 | 36727400 | 53 | hematological malignancy | M | 10 | monosomy 7 | SETBP1, DHX15 | |||||||
P0728 | c.728_729del | p.His243ProfsX38 | frameshift_variant | Novel | LPAT | unknown | 2023 | 36727400 | 56 | cytopenia, hematological malignancy | M | 15 | monosomy 7 | STAG2 | |||||||
P0729 | c.400_422delinsTGAGGGTGGGAG | p.Pro134fsX | frameshift_variant | Novel | PAT | familial | 2023 | 36727400 | 57 | congenital malformations, hematological malignancy | F | 6 | trisomy 1, trisomy 8, der(1;7)(q10;p10) | HPV | Y | DNMT3A, GATA2 | |||||
P0730 | c.194_195del | p.His65ArgfsX119 | frameshift_variant | Novel | LPAT | unknown | 2023 | 36727400 | 59 | immunodeficiency, hematological malignancy | M | 6 | monosomy 7 | ||||||||
P0731 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2023 | 36727400 | 61 | immunodeficiency, hematological malignancy | M | 7 | monosomy 7 | SETBP1 | |||||||
P0732 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | de novo | 2023 | 36727400 | 62 | hematological malignancy (spectrum 2) | F | 12 | +X, trisomy 4, trisomy 8, trisomy 19 | PTPN11 | |||||||
P0733 | c.112C>T | p.Gln38X | stop_gained | Novel | PAT | unknown | 2023 | 36727400 | 67 | congenital malformations, hematological malignancy (spectrum 2) | F | 16 | monosomy 9 | TET2, TET2, TET2 | |||||||
P0734 | exon 5 and 6 deletion | exon 5 and 6 deletion | transcript_ablation | Novel | PAT | de novo | 2023 | 36727400 | 68 | congenital malformations, hematological malignancy | M | 4 | monosomy 7 | SETBP1, ASXL1 | |||||||
P0735 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2023 | 36727400 | 71 | hematological malignancy | M | 20 | trisomy 8, monosomy 7, trisomy 1, der(1;7) | ||||||||
P0736 | c.1118G>A | p.Cys373Tyr | missense_variant | Novel | LPAT | familial | 2023 | 36727400 | 73 | congenital malformations | M | 61 | normal | ||||||||
P0737 | c.1061dup | p.Thr355AspfsX29 | frameshift_variant | Novel | PAT | de novo | 2023 | 36727400 | 75 | cytopenia, hematological malignancy | M | 7 | monosomy 7 | ||||||||
P0738 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2023 | 36727400 | 77 | cytopenia | F | 15 | normal | ||||||||
P0739 | c.367_370del | p.Lys123ArgfsX94 | frameshift_variant | Novel | PAT | de novo | 2023 | 36727400 | 78 | immunodeficiency, hematological malignancy | M | 5 | der(1;7)(q10;p10), trisomy 8, trisomy 19 | EZH2, GATA2 | |||||||
P0740 | c.400_422delinsTGAGGGTGGGAG | p.Pro134fsX | frameshift_variant | Novel | PAT | familial | 2023 | 36727400 | 45 | asymptomatic | M | NA | normal | ||||||||
P0742 | c.710del | p.Gly237AlafsX89 | frameshift_variant | Novel | PAT | de novo | 2017 | 28747912 | 25955867 | Patient 2 | hematological abnormality, immunodeficiency | M | 27 | NA | low NK count, low B cell count, no DC | extensive HSV2 vesicular rash | Y | ||||
P0743 | c.1132A>T | p.Lys378X | stop_gained | Novel | PAT | de novo | 2017 | 28747912 | Patient 3 | hematological abnormality, immunodeficiency | F | 8 | trisomy 8, hyperdiploidity | low B, T, NK cell counts | Y | Y | bilateral bronchiectasia | ||||
P0744 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2020 | 32135276 | Patient X | hematological abnormality, immunodeficiency | NA | NA | monosomy 7 | ||||||||
P0745 | c.1054T>C | p.Cys352Arg | missense_variant | Novel | LPAT | familial | 2017 | 28104920 | #7 | MDS/AML | NA | NA | NA | ||||||||
P0746 | c.1081C>G | p.Arg361Gly | missense_variant | Novel | LPAT | familial | 2017 | 28104920 | #8 | MDS/AML | NA | NA | NA | ||||||||
P0747 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2017 | 28104920 | #9 | hematological abnormality, immunodeficiency | NA | NA | NA | ||||||||
P0748 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2017 | 28104920 | #10 | MDS/AML | NA | NA | NA | ||||||||
P0749 | c.1045T>G | p.Cys349Gly | missense_variant | Novel | LPAT | unknown | 2018 | 29947977 | Patient 1 | MDS-MLD | F | 17 | normal | low B, T, NK cell counts, no DC | HPV | Y | PAP | ||||
P0750 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2014 | 24578498 | Patient J384 | JMML-like MDS/MPN | M | 4 | monosomy 7 | GATA2, KRAS | |||||||
P0751 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | unknown | 2017 | 27894982 | Patient 1 | immunodeficiency, low grade MDS | F | 24 | NA | fever, erythema nodosum | cervical HPV | Y | Y | dyspnea, cough, PAP | |||
P0752 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | unknown | 2021 | 33684095 | 39497062 | Patient 1 | HLH | F | 22 | NA | fever, absent NK cells | CMV | Y | ||||
P0753 | exon 4 deletion | exon 4 deletion | transcript_ablation | Novel | PAT | familial | 2018 | 29365323 | 25 / Family_0666.001 | MDS | F | 23 | monosomy 7 | ||||||||
P0754 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2015 | 26492932 | 1001-001 | MDS-RCMD | F | 15 | normal | ASXL1 | |||||||
P0755 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2015 | 26492932 | 1001-004 | MDS | F | 25 | NA | ||||||||
P0756 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2015 | 26492932 | 1001-005 | MDS, AML | F | 13 | normal | SHROOM2, TUBA3C, HYDIN, STAG2 | |||||||
P0757 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2015 | 26492932 | 1001-006 | MDS | F | 13 | NA | ||||||||
P0758 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2015 | 26492932 | 28642594 | 1002-001 | MDS-RCMD | M | 48 | add(3)(q21),trisomy 8, del(12)(p11.2p13) | STAG2, EZH2, EZH2, CNTN5 | ||||||
P0759 | monoallelic deletion | monoallelic deletion | transcript_ablation | Novel | PAT | de novo | 2018 | 29620682 | Patient 1 | MDS | M | 17 | monosomy 7,+mar | HPV | Y | ||||||
P0760 | c.1021_1031del | p.Ala341SerfsX39 | frameshift_variant | Novel | PAT | familial | 2021 | 33957466 | S1M | MDS | M | 11 | monosomy 7 | ||||||||
P0761 | c.1021_1031del | p.Ala341SerfsX39 | frameshift_variant | Novel | PAT | familial | 2021 | 33957466 | S2F | AML | F | 13 | monosomy 7 | ||||||||
P0762 | c.1021_1031del | p.Ala341SerfsX39 | frameshift_variant | Novel | PAT | familial | 2021 | 33957466 | S3F | MDS | F | 16 | monosomy 7, trisomy 8 | ||||||||
P0763 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2015 | 25359990 | 34469508 | 51 | MDS-RCMD | F | 19 | der(1;7)(q10;p10), trisomy 1, trisomy 8 | low B, NK count, monocytopenia | ||||||
P0764 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2020 | 31710708 | Patient 1 | AML | F | 13 | NA | fever, panhypogammaglobulinemia | |||||||
P0765 | c.1099del | p.Asp367ThrfsX20 | frameshift_variant | Novel | PAT | unknown | 2020 | 31710708 | Patient 3 | MDS | M | 22 | NA | low B, NK count, monocytopenia | complicated primary EBV infection, verrucae plantares and vulgares, anal condyloma acuminate (HPV, HSV) | ||||||
P0766 | whole gene deletion | whole gene deletion | transcript_ablation | Novel | PAT | unknown | 2020 | 31710708 | Patient 2 | MDS | M | 12 | NA | low B, NK count, monocytopenia | severe plantar HPV | Y | |||||
P0767 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2020 | 31350183 | 39497062 | Patient 1 | HLH | F | 27 | NA | HLH, low B, NK count, monocytopenia | CMV | |||||
P0768 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2011 | 21670465 | Kindred 5 | AML | M | 19 | NA | recurrent HPV infections | |||||||
P0769 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2016 | 27288520 | AML_165 | AML | NA | NA | NA | DNMT3A, NPM1, PTPN11, WAC | |||||||
P0770 | deletion 3q13.2-q21.3 | deletion 3q13.2-q21.3 | transcript_ablation | Novel | PAT | familial | 2015 | 25619630 | Family 2 P1 | hematological abnormality, immunodeficiency | F | 0 | NA | monocytopenia | |||||||
P0771 | deletion 3q21 | deletion 3q21 | transcript_ablation | Novel | PAT | familial | 2015 | 25619630 | Family 3 P1 | hematological abnormality, immunodeficiency | F | 17 | NA | EBV | |||||||
P0772 | c.1073C>A | p.Thr358Asn | missense_variant | Novel | PAT | familial | 2014 | 24754962 | 25676417, 40148527 | Chicago Family | AML | F | 50 | NA | respiratory failure | ||||||
P0772 | c.1075T>G | p.Leu359Val | missense_variant | Novel | LPAT | familial | 2014 | 24754962 | 25676417, 40148527 | Chicago Family | AML | F | 50 | NA | respiratory failure | ||||||
P0773 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2019 | 30894283 | Patient 1 | immunodeficiency, Emberger syndrome | F | 10 | NA | hypogammaglobulinemia, low B, NK count, monocytopenia | HSV, chronic molluscum contagiosum | Y | Y | ||||
P0774 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2020 | 33363905 | Patient II:2 | MDS-MLD | M | 17 | normal | low B cell count, monocytopenia | HPV | Y | Y | ||||
P0775 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2014 | 25326637 | 50 | MDS, immunodeficiency 21, Emberger sy | NA | 21 | NA | low B, NK count, low DC, monocytopenia | Y | ||||||
P0776 | c.1129T>G | p.Tyr377Asp | missense_variant | Novel | VUS | unknown | 2015 | 26264606 | Case no. 2 | hematological abnormality, immunodeficiency | M | 34 | NA | monocytopenia | chronic labial herpes (HSV) | Y | |||||
P0777 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2015 | 26264606 | 28642594 | Case no. 4 | hematological abnormality, immunodeficiency | F | 38 | NA | monocytopenia | HPV | Y | PAP | |||
P0778 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2016 | 26710799 | 4 (6836) | MDS | F | 66 | NA | low B, NK count | |||||||
P0779 | c.1143+5G>C | p.? | splice_region_variant | Novel | LPAT | unknown | 2016 | 26710799 | 5 (6739) | immunodeficiency | F | NA | NA | monocytopenia | |||||||
P0780 | c.1143+200_1198del | p.Asn381fsX | frameshift_variant | Novel | PAT | de novo | 2017 | 28373026 | Man with WILD syndrome | hematological abnormality, immunodeficiency | M | 17 | normal | Y | ASXL1 | ||||||
P0781 | c.1123C>T | p.Leu375Phe | missense_variant | Novel | LPAT | unknown | 2017 | 29146900 | SJ040268 | AML-MRC | F | 5 | trisomy 8, monosomy 7 | monocytopenia | |||||||
P0782 | c.1126_1133dup | p.Lys378AsnfsX12 | frameshift_variant | Novel | PAT | unknown | 2021 | 33759087 | Patient II-3 | MDS-RCMD | M | 35 | normal | Y | |||||||
P0783 | c.1126_1133dup | p.Lys378AsnfsX12 | frameshift_variant | Novel | PAT | familial | 2021 | 33759087 | Patient III-1 | MDS-RCMD | F | 18 | normal | febrile neutropenia, neutropenia | EBV | Y | |||||
P0784 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2012 | 22430350 | 28642594 | Japanese girl | MDS | F | 19 | NA | panniculitis, low B, NK, low DC monocytopenia | severe VZV, HPV | Y | ||||
P0785 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2015 | 25624456 | Patient | hematological abnormality, immunodeficiency | F | 40 | normal | monocytopenia, absence of NK cells | CMV, HSV | ||||||
P0786 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2017 | 28209719 | Patient 1 | MDS | NA | 60 | NA | monocytopenia | HPV | bronchiectasis/chronic bronchitis | |||||
P0787 | c.803del | p.Gly268fsX? | frameshift_variant | Novel | PAT | unknown | 2017 | 28209719 | Patient 2 | hematological abnormality | NA | 29 | NA | low B, NK cell count, monocytopenia | HPV | Y | bronchiectasis/chronic bronchitis, PAP | ||||
P0788 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2017 | 28209719 | Patient 3 | MDS | NA | 28 | NA | low B, NK cell count, monocytopenia | HPV | ||||||
P0789 | c.1018-1G>T | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2017 | 28209719 | Patient 4 | hematological abnormality | NA | 18 | NA | low NK cell count, monocytopenia, autoimmunity | HPV | bronchiectasis/chronic bronchitis | |||||
P0790 | c.1143+5G>A | p.? | splice_region_variant | Novel | LPAT | unknown | 2017 | 28209719 | Patient 5 | hematological abnormality | NA | 21 | NA | low B, NK cell count, monocytopenia | HPV | bronchiectasis/chronic bronchitis | |||||
P0791 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2017 | 28209719 | Patient 6 | MDS | NA | 7 | NA | low B, NK cell count, monocytopenia | Y | bronchiectasis/chronic bronchitis | |||||
P0792 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2017 | 28209719 | Patient 7 | MDS | NA | 18 | NA | low B, NK cell count, monocytopenia | HPV | Y | Y | bronchiectasis/chronic bronchitis | |||
P0793 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2017 | 28209719 | Patient 8 | MDS | NA | 17 | NA | low B, NK cell count, monocytopenia | HPV | bronchiectasis/chronic bronchitis, PAP | |||||
P0794 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2017 | 28209719 | Patient 9 | hematological abnormality | NA | NA | NA | low B, NK cell count | |||||||
P0795 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | unknown | 2017 | 28209719 | Patient 10 | symptomatic | NA | 29 | NA | ||||||||
P0796 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2017 | 28209719 | Asymptomatic carrier 1 | asymptomatic | NA | 61 | NA | ||||||||
P0797 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2017 | 28209719 | Asymptomatic carrier 2 | asymptomatic | NA | 52 | NA | low NK cell count | |||||||
P0798 | c.1193G>A | p.Arg398Gln | missense_variant | Novel | PAT | familial | 2017 | 28209719 | Asymptomatic carrier 3 | asymptomatic | NA | 32 | NA | low NK cell count | |||||||
P0799 | c.206_208delinsT | p.Arg69LeufsX115 | frameshift_variant | Novel | PAT | de novo | 2021 | 34387894 | SAPATH #1 | AML | NA | NA | NA | ||||||||
P0800 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2021 | 34387894 | SAPATH #2 | MDS | M | 37 | chromosome 1 translocation | low B, NK cell count, monocytopenia, sarcoidosis | Y | dyspnoea, pulmonary fibrosis and bronchiectasis with mediastinal and hilar lymphadenopathy | |||||
P0801 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2021 | 34387894 | SAPATH #4 | immunodeficiency | F | 44 | NA | monocytopenia | HPV | Y | |||||
P0802 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2021 | 34387894 | SAPATH #5 | MDS | M | 14 | NA | ||||||||
P0803 | c.1322_1325dup | p.His442GlnfsX95 | frameshift_variant | Novel | LPAT | unknown | 2021 | 34387894 | SAPATH #6 | AML, t-MDS | NA | NA | NA | ||||||||
P0804 | c.1018-?_1443+?del | del ZF2 & C-terminus | transcript_ablation | Novel | PAT | unknown | 2021 | 34387894 | SAPATH #7 | MDS | M | 30 | NA | Y | |||||||
P0805 | c.1113C>G | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2023 | 36357187 | Patient 1 | MDS | F | 38 | monosomy 7 | low B, NK cell count, lupus anticoagulant positivity | |||||||
P0806 | c.1083_1094del | p.Arg361del4ArgAsnAlaAsn | inframe_deletion | Novel | LPAT | unknown | 2023 | 36357187 | Patient 2 | MDS | M | 25 | NA | low B, T, NK cell count, lupus anticoagulant positivity | Y | ||||||
P0807 | c.898dup | p.Ala300GfsX83 | frameshift_variant | Novel | LPAT | unknown | 2023 | 36357187 | Patient 5 | MDS | F | 34 | NA | low B, T, NK cell count | Y | ||||||
P0808 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2023 | 36357187 | Patient 6 | symptomatic | F | 29 | NA | low B, T, NK cell count, lupus anticoagulant positivity | Y | ||||||
P0809 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2023 | 36357187 | Patient 7 | MDS | F | 32 | trisomy 8 | low B, T, NK cell count, lupus anticoagulant positivity | |||||||
P0810 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2023 | 36357187 | Patient 8 | symptomatic | M | 22 | NA | low B, T, NK cell count, lupus anticoagulant positivity | |||||||
P0811 | c.715C>T | p.Gly239X | stop_gained | Novel | LPAT | unknown | 2023 | 36357187 | Patient 9 | MDS | M | 36 | NA | low B, T, NK cell count, lupus anticoagulant positivity | Y | ||||||
P0812 | uniallelic expression of GATA2 | uniallelic expression of GATA2 | transcript_ablation | Novel | PAT | unknown | 2023 | 36357187 | Patient 10 | T-cell lymphoma | F | 21 | NA | low B, T cell count, lupus anticoagulant positivity | |||||||
P0813 | c.1168_1170del | p.390delLys | inframe_deletion | Novel | LPAT | NA | 2018 | 29669757 | SOMATIC GATA2 MUTATION PATIENT | MPN/MDS | F | 58 | NA | monocytopenia | PAP | ASXL1 | |||||
P0814 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2023 | 37837580 | 1 | cMDS-LB | M | 14 | normal | leukopenia, neutropenia, monocytopenia | viral infection | Y | EZH2 | ||||
P0815 | c.503_504insGCTC | p.His169LeufsX17 | frameshift_variant | Novel | LPAT | unknown | 2023 | 37837580 | 3 | cMDS-LB | F | 16 | normal | leukopenia, neutropenia, monocytopenia | ASXL1 | ||||||
P0816 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37837580 | 4 | cMDS-IB | F | 17 | monosomy 7 | leukopenia, neutropenia, lymphopenia, monocytopenia | |||||||
P0817 | c.1215G>T | p.Lys405Asn | missense_variant | Novel | VUS | familial | 2023 | 37837580 | 5 | GATA2 deficiency | M | 3 | normal | viral infection | |||||||
P0818 | c.112C>T | p.Gln38X | stop_gained | Novel | PAT | unknown | 2023 | 37837580 | 6 | GATA2 deficiency | M | 15 | NA | inverted CD4/CD8 ratio, leukopenia, neutropenia, lymphopenia, monocytopenia | viral infection | ||||||
P0819 | c.919C>T | p.Arg307Trp | missense_variant | Novel | VUS | unknown | 2023 | 37837580 | 7 | GATA2 deficiency | M | 17 | NA | leukopenia, neutropenia | |||||||
P0820 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2023 | 37837580 | 8 | GATA2 deficiency | M | 5 | NA | inverted CD4/CD8 ratio, neutropenia, monocytopenia | viral infection | ||||||
P0821 | c.1079G>A | p.Trp360X | stop_gained | Novel | PAT | unknown | 2023 | 37837580 | 9 | GATA2 deficiency | F | 13 | trisomy 8 | leukopenia, lymphopenia, monocytopenia | HPV, other viral infection | Y | |||||
P0822 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2023 | 37837580 | 10 | cMDS-IB | F | 16 | normal | inverted CD4/CD8 ratio, leukopenia, neutropenia, lymphopenia, monocytopenia | Y | ||||||
P0823 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2023 | 37837580 | 11 | cMDS-LB | M | 17 | normal | leukopenia, neutropenia, lymphopenia, monocytopenia | |||||||
P0824 | c.1215G>T | p.Lys405Asn | missense_variant | Novel | VUS | familial | 2023 | 37837580 | 12 | cMDS-IB | M | 12 | normal | leukopenia, neutropenia, monocytopenia | viral infection | ||||||
P0825 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2023 | 37837580 | 13 | MDS-LB | F | 20 | trisomy 8 | leukopenia, neutropenia, monocytopenia | Y | ||||||
P0826 | intron 4 deletion | intron 4 deletion | transcript_ablation | Novel | PAT | unknown | 2023 | 37837580 | 15 | AML | F | 14 | normal | leukopenia, neutropenia, monocytopenia | MECOM | ||||||
P0827 | c.1084C>G | p.Arg362Gly | missense_variant | Novel | LPAT | unknown | 2023 | 37837580 | 16 | AML | M | 18 | normal | leukopenia, neutropenia, lymphopenia, monocytopenia | |||||||
P0828 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2023 | 37837580 | 17 | GATA2 deficiency | F | NA | normal | leukopenia, neutropenia, monocytopenia , autoimmunity | viral infection | PAP | |||||
P0829 | c.1046G>A | p.Cys349Tyr | missense_variant | Novel | PAT | familial | 2023 | 37837580 | 18 | cMDS-LB | F | 12 | trisomy 8 | inverted CD4/CD8 ratio, leukopenia, neutropenia | viral infection | Y | PAP | ||||
P0830 | NA | NA | NA | NA | NA | unknown | 2023 | 37837580 | 19 | AML | F | 2 | normal | leukopenia, neutropenia | |||||||
P0831 | NA | NA | NA | NA | NA | familial | 2023 | 37837580 | 20 | cMDS-IB | F | 8 | monosomy 7 | leukopenia, neutropenia, lymphopenia, monocytopenia | viral infection | PAP | |||||
P0832 | c.1057C>T | p.Gln353X | stop_gained | Novel | PAT | unknown | 2023 | 37837580 | 21 | MDS-LB | F | 39 | trisomy 8 | leukopenia, neutropenia, lymphopenia, monocytopenia | viral infection | Y | Y | PAP | |||
P0833 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2023 | 37837580 | 22 | GATA2 deficiency | F | 45 | normal | leukopenia, neutropenia, lymphopenia, monocytopenia, autoimmunity | Y | ||||||
P0834 | c.503_504insGCTC | p.His169LeufsX17 | frameshift_variant | Novel | LPAT | unknown | 2023 | 37837580 | 23 | asymptomatic | M | 43 | NA | ||||||||
P0835 | c.1215G>T | p.Lys405Asn | missense_variant | Novel | VUS | unknown | 2023 | 37837580 | 24 | asymptomatic | F | 45 | NA | leukopenia, neutropenia | |||||||
P0836 | c.1046G>A | p.Cys349Tyr | missense_variant | Novel | PAT | familial | 2023 | 37837580 | 25 | asymptomatic | M | 54 | NA | ||||||||
P0837 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2023 | 37837580 | 26 | cMDS-LB | F | 11 | monosomy 7 | Y | |||||||
P0838 | c.1150A>G | p.Arg384Gly | missense_variant | Novel | LPAT | unknown | 2023 | 37837580 | 27 | AML | F | 19 | monosomy 7 | leukopenia, neutropenia | Y | ||||||
P0839 | c.372_373insT | p.Pro125SerfsX60 | frameshift_variant | Novel | LPAT | unknown | 2023 | 37837580 | 39015540 | 28 | MDS-IB, AML | M | 52 | trisomy 8 | inverted CD4/CD8 ratio, leukopenia, neutropenia, monocytopenia | anogenital HPV | Y | ASXL1, EZH2, RUNX1 | |||
P0840 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2023 | 37837580 | 29 | MDS-LB | F | 36 | trisomy 8 | leukopenia, neutropenia, monocytopenia | HPV | Y | |||||
P0841 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2023 | 37837580 | 30 | cMDS-LB | F | 9 | monosomy 7 | inverted CD4/CD8 ratio, leukopenia, neutropenia, monocytopenia, autoimmunity | HPV | ||||||
P0842 | c.257_258del | p.Cys85fsX? | frameshift_variant | Novel | PAT | unknown | 2023 | 37837580 | 31 | cMDS-LB | M | 9 | monosomy 7 | neutropenia, monocytopenia , autoimmunity | HPV, other viral infection | ||||||
P0843 | c.649C>T | p.Leu217Leu | synonymous_variant | 1.352E-05 | VUS | unknown | 2020 | 32555368 | P4 (LT) | MDS-RCC | M | 3 | monosomy 7 | ||||||||
P0844 | c.950A>G | p.Asn317Ser | missense_variant | Novel | VUS | unknown | 2021 | 33560389 | MPN patient | PMF | F | 38 | t(3;12)(p21;p13) | cutaneous herpes zoster | JAK2 V617F | ||||||
P0845 | c.121C>G | p.Pro41Ala | missense_variant | 0.0005068 | VUS | unknown | 2018 | 29365323 | 35 | hypereosinophilia (spectrum 1) | M | NA | NA | ||||||||
P0846 | c.121C>G | p.Pro41Ala | missense_variant | 0.0005068 | VUS | unknown | 2018 | 29797310 | 14 | hematological abnormality, immunodeficiency | F | NA | NA | B cell deficiency, recurrent fever, B cell count low | oral aphtous lesions | ||||||
P0847 | c.1024G>A | p.Ala342Thr | missense_variant | 2.704E-05 | VUS | unknown | 2014 | 24033149 | Pt2 | AML-M0 | F | 7 | NA | NRAS (VUS) | |||||||
P0848 | c.1086_1087ins63 | p.Asn363delins22 | inframe_insertion | Novel | VUS | unknown | 2019 | 31340620 | Patient ID#10 | AML | M | 14 | monosomy 7 | GATA2 (VUS) | |||||||
P0849 | c.1143+8C>T | p.? | splice_region_variant | 2.703E-05 | VUS | unknown | 2021 | 33715335 | Patient 1 | AML, MDS | F | 21 | NA | chronic hepatitis B, HPV | Y | ||||||
P0850 | c.1286G>C | p.Ser429Thr | missense_variant | 3.379E-05 | VUS | unknown | 2019 | 31340620 | Patient ID#3 | MDS-RCC | M | 3 | normal | ||||||||
P0851 | c.610C>T | p.Arg204X | stop_gained | Novel | PAT | familial | 2021 | 33410496 | 39497062 | Chinese Han woman | HLH | F | 17 | NA | recurrent fever, decreased NK cell activity, panniculitis, low B, NK cell count, low DC, erythema nodosum | VZV | Y | pleural effusion | |||
P0852 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | familial | 2018 | 29412158 | MRD 1 | MDS | M | 24 | normal | skin/genital HPV | Y | ||||||
P0853 | c.1123delinsCT | p.Leu375Ser | inframe_insertion | Novel | VUS | unknown | 2018 | 29412158 | URD 3 | AML | F | 25 | trisomy 8, trisomy 20 | Behcet's disease | |||||||
P0854 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2018 | 29412158 | URD 6 | MDS | M | 21 | monosomy 7 | HPV | Y | ||||||
P0855 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2018 | 29412158 | URD 10 | MDS | F | 28 | normal | genital HPV | Y | ||||||
P0856 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2018 | 29412158 | URD 13 | MDS | M | 30 | monosomy 7 | hand-foot-mouth virus | |||||||
P0857 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | unknown | 2018 | 29412158 | Haplo 1 | MDS, Emberger-syndrome | F | 45 | normal | HPV | Y | ||||||
P0858 | c.1021del | p.Ala341ProfsX46 | frameshift_variant | Novel | PAT | unknown | 2018 | 29412158 | Haplo 4 | MDS | M | 26 | normal | HPV, west Nile encephalitis | |||||||
P0859 | c.803del | p.Gly268fsX? | frameshift_variant | Novel | PAT | unknown | 2018 | 29412158 | Haplo 5 | MDS | F | 34 | normal | genital HPV | Y | ||||||
P0860 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2018 | 29412158 | Haplo 6 | MDS | F | 16 | normal | labial HSV | |||||||
P0861 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2018 | 29412158 | 39497062 | Haplo 7 | MDS, HLH | F | 17 | trisomy 8 | HLH | CMV, parvovirus | |||||
P0862 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2023 | 36740376 | index case | MonoMAC | M | 28 | normal | intermittent fever, inverted CD4/CD8 ratio, mild hypogammaglobulinemia, low T cell, B cell, NK cell count | Y | cough, white mucous sputum, shortness of breath after activity, PAP | |||||
P0863 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2022 | 36815365 | index case | SCID, GATA2 deficiency, donor-derived Ph+ ALL | F | 0 | normal | low/absent B, low T, NK cell counts | |||||||
P0864 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2023 | 36726998 | index case | MDS-AML | F | 9 | monosomy 7 | flat HPV on hand | |||||||
P0865 | GATA2 haploinsufficiency | GATA2 haploinsufficiency | transcript_ablation | Novel | PAT | unknown | 2022 | 37799757 | index case | MDS, immunodeficiency | M | 56 | NA | low B, NK cell count | |||||||
P0866 | c.1047T>G | p.Cys349Trp | missense_variant | Novel | LPAT | familial | 2022 | 34793614 | index case | BCP-ALL, GATA2 deficiency | F | 4 | NA | inverted CD4/CD8 ratio, low B, T, NK cell count | |||||||
P0867 | c.445G>A | p.Gly149Arg | missense_variant | 8.112E-05 | VUS | unknown | 2023 | 35983050 | P13 | MDS-EB2 | M | 55 | normal | low B, NK cell count, monocytopenia | |||||||
P0867 | c.1073C>T | p.Thr358Ile | missense_variant | Novel | LPAT | unknown | 2023 | 36815365 | P13 | MDS-EB2 | M | 55 | normal | low B, NK cell count, monocytopenia | |||||||
P0868 | c.1156_1157insAC | p.Leu386HisfsX2 | frameshift_variant | Novel | PAT | unknown | 2023 | 36815365 | P14 | MDS | F | 29 | normal | low B, NK cell count, monocytopenia | STAG2, ASXL1 | ||||||
P0869 | c.1035_1036insTCGGCGGCC | p.Gly346insSerAlaAla | inframe_insertion | Novel | VUS | unknown | 2023 | 36815365 | P15 | MDS | F | 34 | normal | monocytopenia | STAG2, ASXL1 | ||||||
P0870 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2023 | 36815365 | P16 | GATA2 deficiency, deafness | M | 40 | normal | Y | |||||||
P0871 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2023 | 36815365 | P17 | asymptomatic | M | 75 | normal | ||||||||
P0872 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | familial | 2023 | 36815365 | P18 | AML | F | 39 | normal | monocytopenia | |||||||
P0873 | c.351C>G | p.Thr117Thr (r.Val118GlnfsX55) | splice_donor_variant | Novel | PAT | unknown | 2023 | 36815365 | P19 | asymptomatic | M | 49 | normal | monocytopenia | |||||||
P0874 | c.1124T>A | p.Leu375His | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | A154 | MDS-EB | M | 12.7 | normal | ||||||||
P0875 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | A175 | MDS-RCC | M | 10.2 | trisomy 8 | ||||||||
P0876 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | A161 | MDS-EB | M | 12.4 | normal | ||||||||
P0878 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2025 | 40664679 | D1595 | MDS-EB | F | 7.3 | monosomy 7 + add | ||||||||
P0879 | c.1125_1126insG | p.Tyr376ValfsX8 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | D1621 | MDS-EB | M | 13.2 | monosomy 7 | ASXL1, ASXL1, SETBP1 | |||||||
P0880 | c.818del | p.Gly273AspfsX53 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | D1630 | MDS-RCC | M | 16.0 | monosomy 7 | ||||||||
P0881 | c.1017+2T>C | p.? (r.Ser340AlafsX49) | splice_donor_variant | Novel | PAT | unknown | 2025 | 40664679 | D1631 | MDR-AML | M | 12.9 | monosomy 7 + add | ||||||||
P0882 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2024 | 38993648 | 40664679 | D1637 / Case 5 | AML | M | 7.7 | monosomy 7 | neutropenia | ARDS | CUX1, IKZF1 | ||||
P0883 | c.161C>A | p.Ser54X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | D1651 | MDS-RCC | M | 13.9 | monosomy 7 | ||||||||
P0884 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | D1660 | MDS-RCC | M | 4.0 | normal | ||||||||
P0885 | c.229+1dup | p.? | splice_donor_variant | Novel | LPAT | unknown | 2024 | 38993648 | 40664679 | D1663 / Case 2 | MDS/MPS | F | 16.2 | monosomy 7 | ASXL1, ASXL1, SETBP1, WT1 | ||||||
P0886 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | D1676 | MDS-RCC | M | 1.7 | normal | ||||||||
P0887 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | D1685 | MDS-RCC | F | 14.5 | normal | ||||||||
P0888 | c.449dup | p.Gly151ArgfsX34 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | D1686 | MDS-EB | M | 8.6 | monosomy 7 | STAG2 | |||||||
P0889 | c.1312G>T | p.Ala438Ser | missense_variant | 1.352E-05 | VUS | familial | 2025 | 40664679 | D1689 | MDS-RCC | M | 8.8 | normal | ||||||||
P0890 | c.1312G>T | p.Ala438Ser | missense_variant | 1.352E-05 | VUS | unknown | 2025 | 40664679 | 20996 | GATA2 deficiency | M | 41.0 | NA | ||||||||
P0891 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2025 | 40664679 | DK106 | MDS-RCC | F | 8.0 | monosomy 7 | ||||||||
P0892 | c.1402G>A | p.Gly468Ser | missense_variant | 1.353E-05 | VUS | unknown | 2025 | 40664679 | GR025 | MDS-RCC | M | 7.8 | normal | ||||||||
P0893 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2024 | 38993648 | 40664679 | 20367 / Case 4 | GATA2 deficiency | F | 23.8 | normal | ASXL1 | ||||||
P0894 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | 20845 | GATA2 deficiency | F | 6.8 | normal | ||||||||
P0895 | c.1129_1131dup | p.Tyr377dup | inframe_insertion | Novel | VUS | unknown | 2025 | 40664679 | 20864 | MDS-EB | M | 10.3 | normal | ||||||||
P0896 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | 20658 | MDS-EB | F | 11.5 | monosomy 7 | GATA2, GATA2 | |||||||
P0897 | c.1080G>A | p.Trp360X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | 20375 | MDS-EB | M | 10.5 | monosomy 7 | ASXL1, EZH2, SETBP1 | |||||||
P0899 | c.177C>A | p.Tyr59X | stop_gained | Novel | PAT | familial | 2025 | 40664679 | 19221 | MDS | F | 7.2 | monosomy 7 | EZH2, RUNX1, RUNX1, SETBP1 | |||||||
P0900 | c.177C>A | p.Tyr59X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | 19222 | GATA2 deficiency | F | 34.2 | NA | ||||||||
P0901 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | 20205 | MDS-RCC | F | 24.5 | NA | ||||||||
P0902 | c.857C>T | p.Ala286Val | frameshift_variant | Novel | PAT | familial | 2017 | 28104920 | 29365323, 37406166 | sister of 30 / Family_0148.001 | MDS | F | 43 | NA | STAG2, STAG2 | ||||||
P0903 | c.630_643del | p.Lys212ThrfsX? | frameshift_variant | Novel | PAT | familial | 2023 | 37406166 | Family_00B4.044 | MDS-EB1 | F | 16 | NA | KRAS, ASXL1 | |||||||
P0904 | c.1082G>C | p.Arg361Leu | missense_variant | Novel | LPAT | familial | 2023 | 37406166 | relative of Emb-07 I-1 / Family_52_4 | MDS | NA | NA | NA | HOXA11 | |||||||
P0905 | c.1082G>C | p.Arg361Leu | missense_variant | Novel | LPAT | familial | 2023 | 37406166 | relative of Emb-07 I-1 / Family_52_5 | MDS | NA | NA | NA | ||||||||
P0906 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2015 | 26492932 | 1001-003 | asymptomatic | M | 58 | NA | ||||||||
P0907 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37406166 | Family_53_1 | asymptomatic | F | 73 | NA | ||||||||
P0908 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37406166 | Family_53_2 | NA | M | 47 | NA | ||||||||
P0909 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37406166 | Family_53_3 | asymptomatic | M | 44 | NA | DNMT3A | |||||||
P0910 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37406166 | Family_53_5 | asymptomatic | F | NA | NA | ||||||||
P0911 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37406166 | Family_53_7 | MDS | NA | 20 | NA | ||||||||
P0912 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2023 | 37406166 | Family_53_8 | hematological abnormality | F | 16.5 | NA | KDM5A | |||||||
P0913 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2024 | 38317027 | Case 10 | GATA2 deficiency, hematological abnormality | M | 30 | NA | fever, monocytopenia, CD4 cells low | Y | pulmonary infiltrates | |||||
P0914 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2024 | 38205536 | family #15 sibling 1 33 | AML-M4 | NA | NA | NA | ||||||||
P0915 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | familial | 2024 | 38205536 | family #15 sibling 2 269 | AML-M7 | NA | NA | NA | ||||||||
P0916 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2023 | 38137719 | A15 | MDS | M | 22 | trisomy 8 | HPV on nostrils | |||||||
P0917 | c.1168_1170del | p.390delLys | inframe_deletion | Novel | LPAT | unknown | 2023 | 38137719 | A19 | MDS-IB2, AML | M | 27 | normal | SF3B1, U2AF1 | |||||||
P0918 | c.423_426del | p.Tyr141fsX? | frameshift_variant | Novel | LPAT | unknown | 2023 | 38137719 | A20 | MDS-IB1 | M | 28 | trisomy 1, der(1;7)(q10;p10), trisomy 3, trisomy 8, trisomy 9, trisomy 19 | STAG2 | |||||||
P0919 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2023 | 37970879 | CASE REPORT 1 | immunodeficiency | M | 37 | NA | fever, inverted CD4/CD8 ratio, neutropenia, low B, NK cell count,, low CD4 cell count, rheumatoid arthritis | |||||||
P0920 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | NA | 2024 | 37802913 | SOMATIC GATA2 MUTATION PATIENT / 44-year-old woman | DCML | F | 44 | NA | fever, leukopenia, monocytopenia, low B, T cell count | interstitial pneumonia with plasma cell infiltration, PAP | ||||||
P0921 | c.599dup | p.Ser201X | frameshift_variant | Novel | PAT | unknown | 2023 | 37680631 | 39497062 | Chinese Han man | HLH, hematological abnormality | M | 28 | NA | intermittent fever, HLH, leukopenia, monocytopenia, neutropenia, low NK cell count, erythema nodosum | Y | |||||
P0922 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2024 | 37641896 | Japanese woman | GATA2 deficiency | F | 55.0 | NA | inverted CD4/CD8 ratio, leukopenia, monocytopenia, low CD4 T, NK cell counts, Behcet's disease?, erythema nodosum, sarcoidosis | HPV, oral aphtous ulcers | Y | |||||
P0923 | -110 region enhancer A>T | -110 region enhancer A>T | regulatory_region_variant | Novel | VUS | familial | 2023 | 37595058 | second cousin 1 | MDS-RCC | F | 38.0 | trisomy 8 | low B, NK cell count, leukopenia, monocytopenia | disseminated HSV2, genital HPV | ||||||
P0924 | -110 region enhancer A>T | -110 region enhancer A>T | regulatory_region_variant | Novel | VUS | familial | 2023 | 37595058 | second cousin 2 | aplastic anemia | M | 34.0 | trisomy 8 | serum sickness after H-ATG and cyclosporine, low B, NK cell count, leukopenia, monocytopenia | |||||||
P0925 | c.1045T>A | p.Cys349Ser | missense_variant | Novel | LPAT | unknown | 2023 | 38067298 | I377 | MDS-RCC | NA | NA | NA | ||||||||
P0926 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2023 | 37727920 | Patient 3 | secondary HLH, monoMAC | F | 18 | NA | persistent fever, leukopenia | Y | persistent cough | |||||
P0928 | c.783_787dup | p.Gly263AlafsX65 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | BOS-02 | MDS w/ Monosomy 7 | M | 14.5 | monosomy 7 | neutropenia | STAG2, RAD21 (VUS), SMC1A (VUS) | ||||||
P0930 | c.437del | p.Gly146ValfsX72 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | BOS-04 | Monosomy 7 MDS-EB1 | F | 8.1 | monosomy 7, trisomy 21 | severe neutropenia | 4 months of cold symptoms prior to diagnosis | WT1, GATA2, ETV6 (VUS) | |||||
P0932 | c.988C>T | p.Arg330X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | BOS-06 | GATA2 deficiency, monoMAC | F | 19 | normal | B/NK cell counts low, monocytopenia, ANA-positive polyarthritis | EBV | Y | STAG2, CTNNB1 (VUS), SH2B3 (VUS) | ||||
P0933 | c.610C>T | p.Arg204X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | BOS-07 | Monosomy 7 AML | M | 5.5 | monosomy 7 | neutropenia | JAK2, CSF3R, KRAS, WT1, WT1 | ||||||
P0934 | c.610C>T | p.Arg204X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | BOS-08 | cytopenia | M | 2 | normal | B cell count low, neutropenia, monocytopenia | Y | ||||||
P0935 | c.128_153del | p.Asp43AlafsX133 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | BOS-09 | MDS w/ Monosomy 7 | F | 11 | monosomy 7 | neutropenia, monocytopenia | CMV, norovirus, VZV | Y | ASXL1, GATA2, NRAS, NRAS, PTPN11, SETBP1, CUX1 (VUS), SP3A1 (VUS) | ||||
P0936 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2025 | 40664679 | BOS-10 | GATA2 deficiency | F | 16 | NA | neutropenia, psoriasis | viral syndrome | ||||||
P0939 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | BOS-13 | GATA2 deficiency | F | 17.5 | low-level monosomy 7 | ||||||||
P0940 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | BOS-14 | MDS/AML | F | 47 | trisomy 8 | neutropenia | |||||||
P0941 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2025 | 40664679 | BOS-15 | 5q- MDS | F | 10 | 5q31 deletion | CEBPA | |||||||
P0944 | c.405_409delinsGTA | p.Gly136TyrfsX48 | frameshift_variant | Novel | PAT | familial | 2025 | 40664679 | SJG2001 | MDS | F | 9.0 | normal | inverted CD4/CD8 ratio, B cell lymphopenia | Y | ||||||
P0945 | c.1096G>A | p.Gly366Arg | missense_variant | 6.758E-06 | VUS | unknown | 2025 | 40664679 | SJG2002 | symptomatic | M | 32.0 | NA | lymphopenia | frequent HPV | ||||||
P0946 | c.1096G>A | p.Gly366Arg | missense_variant | 6.758E-06 | VUS | familial | 2025 | 40664679 | SJG2003 | severe neutropenia | M | 1.5 | normal | ||||||||
P0947 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2025 | 40664679 | SJG2004 | MDS | M | 7.0 | trisomy 8 | prolonged infections ('stays sicker longer'), no NK | HPV | ||||||
P0948 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2025 | 40664679 | SJG2005 | cytopenia, immunodeficiency | M | 16.0 | normal | allergic rhinitis, inverted CD4/CD8 ratio, lymphopenia, monocytopenia, no NK cells | HPV | Y | |||||
P0950 | c.1078T>A | p.Trp360Arg | missense_variant | Novel | PAT | familial | 2025 | 40664679 | SJG2007 | MDS, AML | M | 10.0 | monosomy 7, trisomy 8 | inverted CD4/CD8 ratio, B, NK cell counts low, 'gets sicker easier than his siblings' | severe COVID19 infection, mononucleosis | Y | ASXL1, BCOR, GATA2, KRAS, NRAS, RUNX1, SMC1A, CDKN1C | ||||
P0951 | c.569del | p.Ala190ValfsX28 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40664679 | 34469508 | SJG2008 / P15 | MDS-EB, AML-MRC | F | 15.0 | trisomy 1, der(1;7)(q10;p10), trisomy 8 | allergic rhinitis, inverted CD4/CD8 ratio, B, NK cell counts low | HPV | SETBP1, MYB, EZH2 | ||||
P0952 | c.437del | p.Gly146ValfsX72 | frameshift_variant | Novel | PAT | unknown | 2025 | 40664679 | SJG2009 | MDS, AML | F | 8.0 | monosomy 7 | prolonged cold symptoms | |||||||
P0953 | c.1018-1G>T | p.? | splice_acceptor_variant | Novel | PAT | familial | 2025 | 40664679 | SJG2010 | asymptomatic | F | 3.0 | NA | ||||||||
P0954 | c.1018-1G>T | p.? | splice_acceptor_variant | Novel | PAT | familial | 2025 | 40664679 | SJG2011 | asymptomatic | M | 10.0 | NA | ||||||||
P0955 | c.1018-1G>T | p.? | splice_acceptor_variant | Novel | PAT | familial | 2025 | 40664679 | SJG2012 | MDS | F | 5.0 | trisomy 8, trisomy 21 | recurrent buccal and vulvar ulcers | HPV, bronchitis | ||||||
P0956 | c.1018-1G>T | p.? | splice_acceptor_variant | Novel | PAT | unknown | 2025 | 40664679 | SJG2013 | GATA2 deficiency, mild phenotype | F | 42.0 | NA | IgG slightly decreased | Y | ||||||
P0970 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2025 | 40664679 | SJG2028 | MDS, immunodeficiency | M | 34 | normal | B, NK, T cell counts low | HPV driven condyloma acuminata, warts | Y | Y | STAG2, STAG2 | |||
P0971 | GATA2 locus duplication | GATA2 locus duplication | transcript_ablation | Novel | PAT | familial | 2021 | 34638133 | 3-year-old girl | MDS, immunodeficiency | F | 3 | trisomy 8 | B, NK cell counts low, monocytopenia | Y | Y | chronic respiratory illness with persistent cough, fatigue, nodular and ground glass infiltrates, and reduced diffusion capacity | ||||
P0972 | uniallelic expression of GATA2 | uniallelic expression of GATA2 | transcript_ablation | Novel | PAT | unknown | 2014 | 25111582 | 27169477, 29375553, 39497062 | Haplo 14 / Patient 14 | HLH, EBV+ T cell lymphoproliferative disorder | F | 20 | normal | HLH | EBV hydroa vacciniforme | |||||
P0973 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | de novo | 2024 | 38730328 | 39497062 | Patient 1 | HLH | M | 28 | normal | fever, HLH, lymphopenia, monocytopenia | EBV | Y | ||||
P0974 | c.1150A>G | p.Arg384Gly | missense_variant | Novel | LPAT | de novo | 2024 | 38730328 | 39497062 | Patient 2 | HLH, MDS | F | 22 | normal | fever, HLH, lymphopenia, monocytopenia | EBV | |||||
P0975 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | unknown | 2024 | 38730328 | 39497062 | Patient 3 | HLH | M | 26 | NA | fever, HLH, lymphopenia, monocytopenia | EBV | Y | ||||
P0976 | c.177C>A | p.Tyr59X | stop_gained | Novel | PAT | unknown | 2021 | 34040617 | 39497062 | student | HLH | F | 29 | NA | fever, HLH, lymphopenia, monocytopenia, neutropenia | Y | |||||
P0977 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | unknown | 2021 | 34473915 | 39497062 | 11-year-old girl | HLH | F | 11 | NA | HLH | EBV | Y | bronchiectasis, progressive respiratory failure | |||
P0978 | c.1077_1078insA | p.Trp360MetfsX24 | frameshift_variant | Novel | PAT | familial | 2018 | 29493060 | 39497062 | 14-year-old male | MDS, HLH | M | 14 | normal | prolonged fever, HLH, leukopenia | Y | |||||
P0979 | NA | p.Arg230HisfsX44 | frameshift_variant | Novel | LPAT | unknown | 2018 | 29618691 | 39497062 | 18-year-old | MDS-RCMD, HLH | M | 18 | normal | HLH | EBV | STAG2 | ||||
P0980 | NA | NA | NA | NA | NA | unknown | 2018 | 28093780 | 29375553 | 29-year-old woman | MDS, immunodeficiency | F | 29 | NA | hidradenitis suppurativa, neutropenia | HPV, chicken pox, Condyloma acuminatum, EBV | |||||
P0981 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | unknown | 2024 | 39328578 | 12-year-old | sterile granulomatous lung disease | M | 12 | NA | fever, sterile granulomatous lung disease, lymphocytopenia, monocytopenia, autoimmune encephalitis | bilateral ground-glass opacities | ||||||
P0982 | c.1180C>T | p.Gln394X | stop_gained | Novel | PAT | unknown | 2024 | 39221430 | adopted 14-year-old | cytopenia | M | 14 | normal | inverted CD4/CD8 ratio, mild hypogammaglobulinemia, low B, T, NK cell counts, monocytopenia | HPV | Y | |||||
P0983 | 10.4 Mb interstitial deletion on 3q12.33q22.1 | 10.4 Mb interstitial deletion on 3q12.33q22.1 | transcript_ablation | Novel | PAT | unknown | 2024 | 38567931 | 4-year-old female | neurodevelopmental symptoms | F | 4 | NA | ||||||||
P0984 | NA | NA | NA | NA | NA | unknown | 2024 | 38563709 | 24-year-old female | HLH | F | 24 | NA | fever, granulomatous necrotizing inflammation, HLH, joint pain, low B, T, NK cell counts, monocytopenia | CMV | ||||||
P0985 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2021 | 34051752 | 39-year-old woman | cytopenia | F | 38 | normal | fever, noncaseating granulomas, leukopenia | recurrent HPV | Y | dyspnea, bilateral pleural effusion | ||||
P0986 | c.354dup | p.Ser119GlufsX66 | frameshift_variant | Novel | LPAT | unknown | 2022 | 36119727 | 30-year-old woman | cytopenia | F | 30 | normal | COVID-19 | Y | Y | pulmonary emphysema, lung interstitium involvement, central bronchiectasia | BCOR, ATM | |||
P0987 | c.917G>A | p.Trp306X | stop_gained | Novel | PAT | de novo | 2024 | 38191334 | N10 | MDS-EB, AML | M | 13 | monosomy 7 | leukopenia | GATA2, RUNX1 | ||||||
P0988 | NA | NA | NA | NA | NA | unknown | 2024 | 38191334 | N12 | MDS-EB | F | 10 | NA | SETBP1, ASXL1 | |||||||
P0995 | c.194_195insT | p.Ala66ArgfsX119 | frameshift_variant | Novel | LPAT | unknown | 2024 | 38951071 | 16-year-old female | MonoMAC | F | 16 | normal | fever, monocytopenia, leukopenia | rhinovirus, HSV-1, EBV | Y | PAP | ||||
P0996 | NA | NA | NA | NA | NA | unknown | 2023 | 37550272 | 40-year-old man | AML | M | 40 | monosomy 7 | febrile neutropenia | Y | PAP | |||||
P0997 | c.1168_1170del | p.390delLys | inframe_deletion | Novel | LPAT | unknown | 2022 | 35891688 | 81-year-old man | MDS-IB, CML?, MonoMAC | M | 81 | t(1;6)(q21;p21), t(13;14) | fever, neutropenia, lymphopenia | hepatitis | Y | GATA2, ASXL1, MPL, U2AF1 | ||||
P0998 | c.1075_1102del | p.Trp360SerfsX18 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40153067 | Family 2, Patient 3 (II-2) | G2BMID | F | 26 | NA | extensive HPV, verrucous plaques, severe COVID-19 | Y | Y | ARDS | ||||
P0999 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2025 | 40264496 | 26-year-old female | infections | F | 26 | NA | lymphopenia, monocytopenia, low B cell count, erythema nodosum | Y | interstitial lung disease | |||||
P1000 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2025 | 40311177 | 25-year-old man | pulmonary disease | M | 25 | NA | lymphopenia, monocytopenia | diffuse molluscum contagiosum | interstitial lung disease, PAP | |||||
P1001 | c.317_318del | p.Ser106CysfsX78 | frameshift_variant | Novel | LPAT | unknown | 2019 | 30478525 | 43-year-old woman | MDS-LB | F | 43 | trisomy 8, trisomy 1, der (1;7)(q10; p10) | asthma, monocytopenia, low B, T, NK cell counts, guttate psoriasis, erythema nodosum | anogenital HPV | Y | PAP | ||||
P1002 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | familial | 2022 | 34529785 | 126.III.4 / 24 | MDS | F | NA | trisomy 8 | ||||||||
P1003 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | familial | 2022 | 34529785 | 126.III.23 / 26 | MDS | M | NA | trisomy 8 | STAG2, STAG2 | |||||||
P1004 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | familial | 2022 | 34529785 | 126.II.8 / 27 | asymptomatic | F | NA | normal | ||||||||
P1005 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | familial | 2022 | 34529785 | 126.II.4 / 28 | asymptomatic | M | NA | normal | ||||||||
P1006 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 48.II.11 | asymptomatic | F | NA | normal | CUX1, DNMT3A, KMT2A, KMT2A, U2AF1 | |||||||
P1007 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 48.III.14 | G2BMID | F | NA | der(1;14)(q10;p10), trisomy 21 | STAG2 | |||||||
P1008 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 48.II.6 | asymptomatic | F | NA | normal | ||||||||
P1009 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 48.II.2 | asymptomatic | F | NA | normal | ||||||||
P1010 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 48.II.8 | asymptomatic | M | NA | normal | ||||||||
P1011 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 34089740 | 51.III.1 | G2BMID | F | 24 | normal | ASXL1 | ||||||
P1012 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2022 | 34529785 | 51.II.1 | asymptomatic | M | NA | normal | ||||||||
P1013 | c.1082G>C | p.Arg361Leu | missense_variant | Novel | LPAT | familial | 2022 | 34529785 | 52.II.4 | G2BMID | F | NA | normal | BCL9 | |||||||
P1014 | c.1082G>C | p.Arg361Leu | missense_variant | Novel | LPAT | familial | 2022 | 34529785 | 52.II.5 | G2BMID | F | NA | normal | ||||||||
P1015 | c.1082G>C | p.Arg361Leu | missense_variant | Novel | LPAT | familial | 2022 | 34529785 | P1018 | MDS | M | NA | normal | STAG2 | |||||||
P1016 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2022 | 34529785 | 349.II.4 | MDS | F | NA | trp(1)(q21q32) | DNMT3A, DNMT3A, U2AF1 | |||||||
P1017 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 34089740 | 349.IV.5 | G2BMID | M | 30 | normal | |||||||
P1018 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 349.III.16 | MDS | F | NA | trisomy 8 | ||||||||
P1019 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 349.IV.7 | G2BMID | F | NA | normal | ||||||||
P1020 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 4.III.4 | MDS | M | NA | monosomy 7, trisomy 8 | ||||||||
P1021 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 4.III.5 | CMML | M | NA | monosomy 7 | ASXL1, SETBP1, U2AF1 | |||||||
P1022 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 1.III.2 | asymptomatic | M | NA | normal | DNMT3A | |||||||
P1023 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 34089740 | 1.IV.1 | G2BMID | F | 17 | normal | |||||||
P1024 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2022 | 34529785 | 368.I.1 | asymptomatic | F | NA | NA | DNMT3A | |||||||
P1025 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 368.II.1 | MDS | M | NA | monosomy 7 | ||||||||
P1026 | c.802G>T | p.Gly268X | stop_gained | Novel | PAT | unknown | 2022 | 34529785 | 129.I.1 | MDS | F | NA | del(13)(q12q14) | ||||||||
P1027 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2022 | 34529785 | 159.I.1 | AML | F | NA | trisomy 8, monosomy 13 | KMT2A, MECOM | |||||||
P1028 | c.1021del | p.Ala341ProfsX46 | frameshift_variant | Novel | PAT | familial | 2022 | 34529785 | 203.I.1 | G2BMID | M | NA | normal | DNMT3A | |||||||
P1029 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | unknown | 2022 | 34529785 | 216.I.1 | MDS | F | NA | der(1;7)(q10;p10), 1+der(1;13)(q10;q10), trisomy 8, monosomy X | ASXL1 | |||||||
P1030 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | de novo | 2022 | 34529785 | 218.I.1 | MDS | F | NA | trisomy 8 | DNMT3A | |||||||
P1031 | c.803del | p.Gly268fsX? | frameshift_variant | Novel | PAT | de novo | 2022 | 34529785 | 233.I.1 | G2BMID | F | NA | normal | ||||||||
P1032 | c.1123C>T | p.Leu375Phe | missense_variant | Novel | LPAT | de novo | 2022 | 34529785 | 34089740 | 256.I.1 | AML | F | 25 | trisomy 8, trisomy 20 | NRAS | ||||||
P1033 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | familial | 2022 | 34529785 | 34089740 | 270.I.1 | G2BMID | M | NA | normal | BCOR | ||||||
P1034 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | de novo | 2022 | 34529785 | 34089740 | 277.I.1 | MDS | F | 18 | trisomy 8 | |||||||
P1035 | c.1186C>T | p.Arg396Trp | missense_variant | Novel | LPAT | unknown | 2022 | 34529785 | 281.I.1 | MDS | F | NA | inv(9)(p12q13) | ASXL1 | |||||||
P1036 | c.58C>T | p.Gln20X | stop_gained | Novel | PAT | familial | 2022 | 34529785 | 34469508 | 283.II.1 / P12 | MDS-MLD | F | 23 | der(1;7)(q10:p10) | HPV | Y | STAG2, RUNX1, BCOR | ||||
P1037 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2022 | 34529785 | 291.I.1 | MDS | M | NA | monosomy 7 | STAG2 | |||||||
P1038 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2022 | 34529785 | 293.I.1 | AML | M | NA | der(5) t(5;13)(q13q13) | ||||||||
P1039 | c.1018_1034del | p.Ser340fsX | frameshift_variant | Novel | PAT | de novo | 2022 | 34529785 | 34089740 | 324.I.1 | MDS | F | NA | trisomy 8 | STAG2 | ||||||
P1040 | c.898dup | p.Ala300GfsX83 | frameshift_variant | Novel | LPAT | familial | 2022 | 34529785 | 330.I.1 | MDS | F | NA | normal | ASXL1, BCOR | |||||||
P1041 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2022 | 34529785 | 335.II.1 | asymptomatic | F | NA | normal | ||||||||
P1042 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 335.III.1 | MDS | F | NA | normal | ||||||||
P1043 | c.921dup | p.Arg308AlafsX? | frameshift_variant | Novel | LPAT | unknown | 2022 | 34529785 | 337.I.1 | G2BMID | F | NA | normal | STAG2 | |||||||
P1044 | c.1159_1160dup | p.Met388fsX? | frameshift_variant | Novel | PAT | familial | 2022 | 34529785 | 340.II.1 | G2BMID | M | NA | monosomy 7, der(1;7)(q10;p10), del(13)(q12q22) | STAG2‡ | |||||||
P1045 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2022 | 34529785 | 342.I.1 | MDS | M | NA | monosomy 7 | SAMD9, SETBP1, U2AF1 | |||||||
P1046 | c.1017+2T>A | p.? | splice_donor_variant | Novel | PAT | de novo | 2022 | 34529785 | 347.I.1 | MDS | F | NA | normal | STAG2 | |||||||
P1047 | c.248del | p.Gln83ArgfsX? | frameshift_variant | Novel | PAT | de novo | 2022 | 34529785 | 350.I.1 | MDS | F | NA | normal | ||||||||
P1048 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | de novo | 2022 | 34529785 | 34089740 | 351.I.1 | MDS | F | 17 | normal | |||||||
P1049 | c.1017+1G>T | p.? | splice_donor_variant | Novel | LPAT | unknown | 2022 | 34529785 | 357.I.1 | MDS | F | NA | trisomy 8 | ASXL1 | |||||||
P1050 | c.1017+1G>T | p.? | splice_donor_variant | Novel | LPAT | familial | 2022 | 34529785 | 34089740 | 357.II.1 | MDS | F | NA | monosomy 7 | RUNX1 | ||||||
P1051 | c.1024_1025insGCCG | p.Ala342GlyfsX | frameshift_variant | Novel | LPAT | unknown | 2022 | 34529785 | 34089740 | 360.I.1 | G2BMID | F | 20 | normal | STAG2 | ||||||
P1052 | c.247C>T | p.Gln83X | stop_gained | Novel | PAT | de novo | 2022 | 34529785 | 362.I.1 | MDS | F | NA | monosomy 7 | STAG2, STAG2 | |||||||
P1053 | c.1081C>T | p.Arg361Cys | missense_variant | 6.759E-06 | LPAT | familial | 2022 | 34529785 | 34469508 | 365.I.1 / P11 | MDS-MLD | M | 37 | der(1;7)(q10;p10), trisomy 8 | low B, DC counts, monocytopenia | STAG2, STAG2 | |||||
P1054 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2022 | 34529785 | 367.I.1 | MDS | F | NA | trisomy 8 | ||||||||
P1055 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2022 | 34529785 | 370.I.1 | MDS | F | NA | normal | ASXL1, RUNX1 | |||||||
P1056 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 375.I.2 | MDS | F | NA | (1)t(1;15), trisomy 8 | ASXL1, CUX1, RAD21 | |||||||
P1057 | c.1021del | p.Ala341ProfsX46 | frameshift_variant | Novel | PAT | unknown | 2022 | 34529785 | 34089740 | 378.I.1 | MDS | M | 12 | normal | BCOR | ||||||
P1058 | c.1277C>G | p.Ser426Cys | missense_variant | Novel | VUS | unknown | 2022 | 34529785 | 379.I.1 | G2BMID | F | NA | normal | ||||||||
P1059 | c.1061C>A | p.Thr354Lys | missense_variant | Novel | LPAT | familial | 2022 | 34529785 | 34089740 | 382.I.2 | MDS | F | 22 | normal | |||||||
P1060 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 384.I.1 | MDS | F | NA | monosomy 7 | ASXL1 | |||||||
P1061 | c.1024_1025insG | p.Ala342GlyfsX | frameshift_variant | Novel | LPAT | unknown | 2022 | 34529785 | 34089740 | 389.I.1 | G2BMID | F | 31 | normal | |||||||
P1062 | c.1009C>T | p.Arg337X | stop_gained | Novel | PAT | de novo | 2022 | 34529785 | 390.I.1 | G2BMID | F | NA | normal | ASXL1, STAG2 | |||||||
P1063 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 34089740 | 393.II.1 | G2BMID | F | 22 | normal | |||||||
P1064 | c.1114G>A | p.Ala372Thr | missense_variant | Novel | LPAT | unknown | 2022 | 34529785 | 394.I.1 | G2BMID | M | NA | normal | ||||||||
P1065 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2022 | 34529785 | 47.I.1 | asymptomatic | F | NA | normal | ||||||||
P1066 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | familial | 2022 | 34529785 | 49.III.2 | G2BMID | F | NA | normal | ||||||||
P1067 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 53.V.3 | MDS | F | NA | normal | ETV6 | |||||||
P1068 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | familial | 2022 | 34529785 | 53.V.4 | G2BMID | F | NA | normal | ||||||||
P1069 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2022 | 34529785 | 65 | G2BMID | F | NA | normal | NOTCH2 | |||||||
P1070 | c.680_683del | p.Ser227fsX? | frameshift_variant | Novel | PAT | de novo | 2022 | 34529785 | 66 | G2BMID | F | NA | normal | STAG2 | |||||||
P1071 | c.1150del | p.Arg384GlyfsX3 | frameshift_variant | Novel | PAT | de novo | 2022 | 34529785 | 71 | G2BMID | M | NA | normal | ||||||||
P1072 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | de novo | 2022 | 34529785 | 77 | G2BMID | F | NA | normal | ||||||||
P1073 | c.1192C>T | p.Arg398Trp | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 80 | G2BMID | F | NA | normal | ||||||||
P1074 | c.840del | p.Lys281SerfsX? | frameshift_variant | Novel | PAT | de novo | 2022 | 34529785 | 82 | G2BMID | F | NA | normal | ||||||||
P1075 | c.1187G>A | p.Arg396Gln | missense_variant | Novel | PAT | familial | 2022 | 34529785 | 95 | MDS | F | NA | normal | ASXL1 | |||||||
P1076 | c.839del | p.Phe280LeufsX? | frameshift_variant | Novel | LPAT | unknown | 2022 | 34529785 | 101 | MDS | M | NA | trisomy 8 | ||||||||
P1077 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | de novo | 2022 | 34529785 | 104 | G2BMID | M | NA | normal | STAG2, STAG2 | |||||||
P1078 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2021 | 34469508 | P9 | MDS unclassified | M | 16 | der(1;7)(q10;p10), trisomy 1 | ||||||||
P1079 | c.345dup | p.Trp116LeufsX69 | frameshift_variant | Novel | LPAT | unknown | 2021 | 34469508 | P14 | MDS-EB | M | 24 | der(1;7)(q10;p10), trisomy 1, trisomy 8 | HPV | GATA2, GATA2, IDH2 | ||||||
P1080 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2021 | 34469508 | P17 | MDS unclassified | F | 31 | der(1;7)(q10;p10), trisomy 1, trisomy 8 | monocytopenia | SF3B1 | ||||||
P1081 | c.1113C>A | p.Asn371Lys | missense_variant | Novel | PAT | unknown | 2021 | 34469508 | P18 | RCC | M | 16 | der(1;7)(q10;p10), trisomy 1 | ||||||||
P1082 | c.803del | p.Gly268fsX? | frameshift_variant | Novel | PAT | unknown | 2021 | 34469508 | P19 | MDS-EB | F | 14 | der(1;7)(q10;p10), trisomy 1, trisomy 8 | STAG2, STAG2, SETBP1 | |||||||
P1083 | c.1021_1024dup | p.Ala342GlyfsX43 | frameshift_variant | Novel | PAT | unknown | 2021 | 34469508 | P20 | AML-MRC | M | 24 | der(1;7)(q10;p10), trisomy 1, trisomy 8 | PAP | |||||||
P1084 | c.971del | p.Lys324ArgfsX2 | frameshift_variant | Novel | LPAT | unknown | 2021 | 34469508 | P21 | RCC | M | 14 | der(1;7)(q10;p10), trisomy 1 | low NK cell count | CMV viremia | ||||||
P1085 | c.1163T>C | p.Met388Thr | missense_variant | Novel | LPAT | unknown | 2021 | 34469508 | P22 | MDS | M | 58 | der(1;7)(q10;p10), trisomy 1, del(Y) | monocytopenia | ASXL1 | ||||||
P1086 | c.631del | p.Val211SerfsX7 | frameshift_variant | Novel | LPAT | unknown | 2021 | 34469508 | P23 | AML | F | 15.8 | trisomy 1,der(1;7)(q10;p10),trisomy 8, trisomy 14, trisomy 19, trisomy 2 | RUNX1, EZH2 | |||||||
P1087 | c.1017+572C>T | p.= | regulatory_region_variant | Novel | LPAT | unknown | 2021 | 34469508 | P24 | MDS-MLD | M | 31 | der(1;7)(q10;p10) | low B, NK cell count, monocytopenia | genital HPV | ETNK1 | |||||
P1088 | c.1061C>T | p.Thr354Met | missense_variant | Novel | PAT | unknown | 2021 | 34469508 | 25 | MDS-MLD | M | 26 | der(1;7)(q10;p10), trisomy 1 | low CD, B, NK cell count, monocytopenia | Y | ASXL1, CUX1, STAG2 | |||||
P1089 | GATA2 deficiency | GATA2 deficiency | transcript_ablation | Novel | PAT | unknown | 2025 | 40340131 | Patient #3 | pulmonary disease | M | 23 | NA | dyspnea, PAP | |||||||
P1090 | c.1084C>T | p.Arg362X | stop_gained | Novel | PAT | unknown | 2025 | 40388595 | GH01_P67 | MDS | M | 34 | normal | STAG2 | |||||||
P1091 | c.1082G>A | p.Arg361His | missense_variant | Novel | LPAT | unknown | 2025 | 40725152 | Patient 2 | RCC, AML | M | 10 | monosomy 7 | ||||||||
P1092 | c.16_17insG | p.Glu6GlyfsX179 | frameshift_variant | Novel | LPAT | unknown | 2025 | 40725152 | Patient 3 | RCC | M | 1 | del(7)(q22q32), monosomy 7 | ||||||||
P1093 | c.1018_1028del | p.Ser340LysfsX40 | frameshift_variant | Novel | PAT | unknown | 2025 | 40725152 | Patient 5 | MDS/AML | F | 11 | monosomy 7, del(X) | SETBP1 |
B-ALL: B-cell acute lymphoblastic leukemia, +add: additional chromosome, AML: acute myeloid leukemia, AML-MRC: with myelodysplasia-related changes, AUL: acute undifferentiated leukemia, BM: bone marrow, chr: chromosome, cMDS-LB: childhood MDS with low blasts, CMML: chronic myelomonocytic leukemia, DCML: dendritic cell: monocyte: B and NK lymphoid deficiency, del: deletion, der: derived chromosome, dic: dicentric chromosome, HLH: hemophagocytic lymphohistiocytosis, i: inversion, ITP: immune thrombocytopenia, LGL: large granular lymphocyte leukemia: LPAT: Likely Pathogenic, M0-M7: subgroups of the French-American-British (FAB) classification of AML, MDR-AML: MDS-related AML, MDS: myelodysplastic syndrome, MDS-EB: MDS with excess blast, MDS-IB: MDS with increased blasts, MPN: myeloproliferative neoplasm, MDS-LB: MDS with low blasts: MDS-SLD: MDS with single lineage dysplasia, MDS-U: unclassifiable MDS, NA: not available, NHL: non-Hodgkin lymphoma, NK: natural killer, PAT: Pathogenic, RAEB: refractory cytopenia with excess blast, RAEBt: refractory anemia with excess of blasts in transformation, PBL: plasmablastic lymphoma, PMF: primary myelofibrosis, RCC: refractory cytopenia of childhood, RCMD: refractory cytopenia with multilineage dysplasia, RCUD: refractory cytopenia with unilineage dysplasia, sAML: secondary AML, SLE: systemic lupus erythematosus: t: translocation, T-ALL: T-cell acute lymphoblastic leukemia, T-AML: therapy-related AML, t-MDS: therapy-related MDS, tris: trisomy, VUS: Variant of Unknown Significance